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  1. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:21:28,604| In method AdministrationService.saveGlobalProperty. Arguments: GlobalProperty=property: initializer.started value: true,
  2. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:21:28,624| Exiting method saveGlobalProperty
  3. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:21:28,632| In method AdministrationService.saveGlobalProperty. Arguments: GlobalProperty=property: initializer.mandatory value: false,
  4. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:21:28,648| Exiting method saveGlobalProperty
  5. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:21:28,660| In method SchedulerService.saveToMemento. Arguments:
  6. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:21:28,678| Exiting method saveToMemento
  7. INFO - ServiceContext.startRefreshingContext(832) |2020-04-15 23:21:28,695| Refreshing Context
  8. INFO - EhCacheManagerFactoryBean.destroy(181) |2020-04-15 23:21:28,833| Shutting down EhCache CacheManager
  9. INFO - EhCacheManagerFactoryBean.afterPropertiesSet(129) |2020-04-15 23:21:38,088| Initializing EhCache CacheManager
  10. Exception in thread "Thread-520" org.hibernate.service.UnknownServiceException: Unknown service requested [org.hibernate.engine.jdbc.connections.spi.ConnectionProvider]
  11. at org.hibernate.service.internal.AbstractServiceRegistryImpl.getService(AbstractServiceRegistryImpl.java:201)
  12. at org.hibernate.internal.AbstractSessionImpl.getJdbcConnectionAccess(AbstractSessionImpl.java:341)
  13. at org.hibernate.engine.jdbc.internal.JdbcCoordinatorImpl.<init>(JdbcCoordinatorImpl.java:114)
  14. at org.hibernate.engine.transaction.internal.TransactionCoordinatorImpl.<init>(TransactionCoordinatorImpl.java:89)
  15. at org.hibernate.internal.SessionImpl.<init>(SessionImpl.java:258)
  16. at org.hibernate.internal.SessionFactoryImpl$SessionBuilderImpl.openSession(SessionFactoryImpl.java:1589)
  17. at org.hibernate.internal.SessionFactoryImpl.openSession(SessionFactoryImpl.java:999)
  18. at org.openmrs.api.db.hibernate.HibernateContextDAO.openSession(HibernateContextDAO.java:305)
  19. at sun.reflect.GeneratedMethodAccessor289.invoke(Unknown Source)
  20. at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
  21. at java.lang.reflect.Method.invoke(Method.java:498)
  22. at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:317)
  23. at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:201)
  24. at com.sun.proxy.$Proxy353.openSession(Unknown Source)
  25. at org.openmrs.api.context.Context.openSession(Context.java:772)
  26. at org.openmrs.api.context.Daemon$6.run(Daemon.java:353)
  27. Exception in thread "Thread-523" Exception in thread "Thread-522" org.hibernate.service.UnknownServiceException: Unknown service requested [org.hibernate.engine.jdbc.connections.spi.ConnectionProvider]
  28. at org.hibernate.service.internal.AbstractServiceRegistryImpl.getService(AbstractServiceRegistryImpl.java:201)
  29. at org.hibernate.internal.AbstractSessionImpl.getJdbcConnectionAccess(AbstractSessionImpl.java:341)
  30. at org.hibernate.engine.jdbc.internal.JdbcCoordinatorImpl.<init>(JdbcCoordinatorImpl.java:114)
  31. at org.hibernate.engine.transaction.internal.TransactionCoordinatorImpl.<init>(TransactionCoordinatorImpl.java:89)
  32. at org.hibernate.internal.SessionImpl.<init>(SessionImpl.java:258)
  33. at org.hibernate.internal.SessionFactoryImpl$SessionBuilderImpl.openSession(SessionFactoryImpl.java:1589)
  34. at org.hibernate.internal.SessionFactoryImpl.openSession(SessionFactoryImpl.java:999)
  35. at org.openmrs.api.db.hibernate.HibernateContextDAO.openSession(HibernateContextDAO.java:305)
  36. at sun.reflect.GeneratedMethodAccessor289.invoke(Unknown Source)
  37. at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
  38. at java.lang.reflect.Method.invoke(Method.java:498)
  39. at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:317)
  40. at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:201)
  41. at com.sun.proxy.$Proxy353.openSession(Unknown Source)
  42. Exception in thread "Thread-524" at org.openmrs.api.context.Context.openSession(Context.java:772)
  43. at org.openmrs.api.context.Daemon$6.run(Daemon.java:353)
  44. org.hibernate.service.UnknownServiceException: Unknown service requested [org.hibernate.engine.jdbc.connections.spi.ConnectionProvider]
  45. at org.hibernate.service.internal.AbstractServiceRegistryImpl.getService(AbstractServiceRegistryImpl.java:201)
  46. at org.hibernate.internal.AbstractSessionImpl.getJdbcConnectionAccess(AbstractSessionImpl.java:341)
  47. Exception in thread "Thread-521" at org.hibernate.engine.jdbc.internal.JdbcCoordinatorImpl.<init>(JdbcCoordinatorImpl.java:114)
  48. at org.hibernate.engine.transaction.internal.TransactionCoordinatorImpl.<init>(TransactionCoordinatorImpl.java:89)
  49. at org.hibernate.internal.SessionImpl.<init>(SessionImpl.java:258)
  50. at org.hibernate.internal.SessionFactoryImpl$SessionBuilderImpl.openSession(SessionFactoryImpl.java:1589)
  51. at org.hibernate.internal.SessionFactoryImpl.openSession(SessionFactoryImpl.java:999)
  52. at org.openmrs.api.db.hibernate.HibernateContextDAO.openSession(HibernateContextDAO.java:305)
  53. at sun.reflect.GeneratedMethodAccessor289.invoke(Unknown Source)
  54. at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
  55. at java.lang.reflect.Method.invoke(Method.java:498)
  56. at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:317)
  57. at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:201)
  58. at com.sun.proxy.$Proxy353.openSession(Unknown Source)
  59. at org.openmrs.api.context.Context.openSession(Context.java:772)
  60. at org.openmrs.api.context.Daemon$6.run(Daemon.java:353)
  61. org.hibernate.service.UnknownServiceException: Unknown service requested [org.hibernate.engine.jdbc.connections.spi.ConnectionProvider]
  62. at org.hibernate.service.internal.AbstractServiceRegistryImpl.getService(AbstractServiceRegistryImpl.java:201)
  63. at org.hibernate.internal.AbstractSessionImpl.getJdbcConnectionAccess(AbstractSessionImpl.java:341)
  64. at org.hibernate.engine.jdbc.internal.JdbcCoordinatorImpl.<init>(JdbcCoordinatorImpl.java:114)
  65. at org.hibernate.engine.transaction.internal.TransactionCoordinatorImpl.<init>(TransactionCoordinatorImpl.java:89)
  66. at org.hibernate.internal.SessionImpl.<init>(SessionImpl.java:258)
  67. at org.hibernate.internal.SessionFactoryImpl$SessionBuilderImpl.openSession(SessionFactoryImpl.java:1589)
  68. at org.hibernate.internal.SessionFactoryImpl.openSession(SessionFactoryImpl.java:999)
  69. at org.openmrs.api.db.hibernate.HibernateContextDAO.openSession(HibernateContextDAO.java:305)
  70. at sun.reflect.GeneratedMethodAccessor289.invoke(Unknown Source)
  71. at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
  72. at java.lang.reflect.Method.invoke(Method.java:498)
  73. at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:317)
  74. at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:201)
  75. at com.sun.proxy.$Proxy353.openSession(Unknown Source)
  76. at org.openmrs.api.context.Context.openSession(Context.java:772)
  77. at org.openmrs.api.context.Daemon$6.run(Daemon.java:353)
  78. org.hibernate.service.UnknownServiceException: Unknown service requested [org.hibernate.engine.jdbc.connections.spi.ConnectionProvider]
  79. at org.hibernate.service.internal.AbstractServiceRegistryImpl.getService(AbstractServiceRegistryImpl.java:201)
  80. at org.hibernate.internal.AbstractSessionImpl.getJdbcConnectionAccess(AbstractSessionImpl.java:341)
  81. at org.hibernate.engine.jdbc.internal.JdbcCoordinatorImpl.<init>(JdbcCoordinatorImpl.java:114)
  82. at org.hibernate.engine.transaction.internal.TransactionCoordinatorImpl.<init>(TransactionCoordinatorImpl.java:89)
  83. at org.hibernate.internal.SessionImpl.<init>(SessionImpl.java:258)
  84. at org.hibernate.internal.SessionFactoryImpl$SessionBuilderImpl.openSession(SessionFactoryImpl.java:1589)
  85. at org.hibernate.internal.SessionFactoryImpl.openSession(SessionFactoryImpl.java:999)
  86. at org.openmrs.api.db.hibernate.HibernateContextDAO.openSession(HibernateContextDAO.java:305)
  87. at sun.reflect.GeneratedMethodAccessor289.invoke(Unknown Source)
  88. at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
  89. at java.lang.reflect.Method.invoke(Method.java:498)
  90. at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:317)
  91. at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:201)
  92. at com.sun.proxy.$Proxy353.openSession(Unknown Source)
  93. at org.openmrs.api.context.Context.openSession(Context.java:772)
  94. at org.openmrs.api.context.Daemon$6.run(Daemon.java:353)
  95. WARN - SimpleUrlHandlerMapping.registerHandlers(115) |2020-04-15 23:23:16,534| Neither 'urlMap' nor 'mappings' set on SimpleUrlHandlerMapping
  96. java.lang.IllegalStateException: Servlets can not be added to context /openmrs as the context has been initialised
  97. at org.apache.catalina.core.ApplicationContext.addServlet(ApplicationContext.java:1189)
  98. at org.apache.catalina.core.ApplicationContext.addServlet(ApplicationContext.java:1153)
  99. at org.apache.catalina.core.ApplicationContextFacade.addServlet(ApplicationContextFacade.java:523)
  100. at org.openmrs.web.WebComponentRegistrar.setServletContext(WebComponentRegistrar.java:38)
  101. at org.springframework.web.context.support.ServletContextAwareProcessor.postProcessBeforeInitialization(ServletContextAwareProcessor.java:103)
  102. at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyBeanPostProcessorsBeforeInitialization(AbstractAutowireCapableBeanFactory.java:408)
  103. at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1558)
  104. at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:539)
  105. at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:476)
  106. at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:303)
  107. at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230)
  108. at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:299)
  109. at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)
  110. at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:762)
  111. at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:757)
  112. at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:480)
  113. at org.openmrs.module.ModuleUtil.refreshApplicationContext(ModuleUtil.java:888)
  114. at org.openmrs.module.web.WebModuleUtil.refreshWAC(WebModuleUtil.java:847)
  115. at org.openmrs.module.web.WebModuleUtil.startModule(WebModuleUtil.java:312)
  116. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:94)
  117. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:89)
  118. at org.openmrs.module.webservices.rest.web.v1_0.resource.openmrs1_8.ModuleResource1_8.upload(ModuleResource1_8.java:187)
  119. at org.openmrs.module.webservices.rest.web.v1_0.controller.MainResourceController.upload(MainResourceController.java:104)
  120. at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
  121. at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
  122. at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
  123. at java.lang.reflect.Method.invoke(Method.java:498)
  124. at org.springframework.web.bind.annotation.support.HandlerMethodInvoker.invokeHandlerMethod(HandlerMethodInvoker.java:177)
  125. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.invokeHandlerMethod(AnnotationMethodHandlerAdapter.java:446)
  126. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.handle(AnnotationMethodHandlerAdapter.java:434)
  127. at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:943)
  128. at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:877)
  129. at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:966)
  130. at org.springframework.web.servlet.FrameworkServlet.doPost(FrameworkServlet.java:868)
  131. at javax.servlet.http.HttpServlet.service(HttpServlet.java:650)
  132. at org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:842)
  133. at javax.servlet.http.HttpServlet.service(HttpServlet.java:731)
  134. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:303)
  135. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  136. at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52)
  137. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  138. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  139. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:73)
  140. at org.openmrs.web.filter.GZIPFilter.doFilterInternal(GZIPFilter.java:65)
  141. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  142. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  143. at org.openmrs.module.webservices.rest.web.filter.AuthorizationFilter.doFilter(AuthorizationFilter.java:105)
  144. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  145. at org.openmrs.module.webservices.rest.web.filter.ContentTypeFilter.doFilter(ContentTypeFilter.java:64)
  146. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  147. at org.springframework.web.filter.ShallowEtagHeaderFilter.doFilterInternal(ShallowEtagHeaderFilter.java:82)
  148. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  149. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  150. at org.openmrs.module.owa.filter.OwaFilter.doFilter(OwaFilter.java:57)
  151. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  152. at org.openmrs.module.referenceapplication.filter.RequireLoginLocationFilter.doFilter(RequireLoginLocationFilter.java:93)
  153. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  154. at org.openmrs.module.web.filter.ModuleFilter.doFilter(ModuleFilter.java:57)
  155. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  156. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  157. at org.openmrs.web.filter.OpenmrsFilter.doFilterInternal(OpenmrsFilter.java:109)
  158. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  159. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  160. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  161. at org.springframework.orm.hibernate4.support.OpenSessionInViewFilter.doFilterInternal(OpenSessionInViewFilter.java:150)
  162. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  163. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  164. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  165. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  166. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  167. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  168. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  169. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  170. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  171. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  172. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  173. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  174. at org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:88)
  175. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  176. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  177. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  178. at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:219)
  179. at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:110)
  180. at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:494)
  181. at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:169)
  182. at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:104)
  183. at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:1025)
  184. at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:116)
  185. at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:445)
  186. at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1137)
  187. at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:637)
  188. at org.apache.tomcat.util.net.AprEndpoint$SocketWithOptionsProcessor.run(AprEndpoint.java:2512)
  189. at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
  190. at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
  191. at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
  192. at java.lang.Thread.run(Thread.java:748)
  193. WARN - SimpleUrlHandlerMapping.registerHandlers(115) |2020-04-15 23:23:18,946| Neither 'urlMap' nor 'mappings' set on SimpleUrlHandlerMapping
  194. INFO - ServiceContext.doneRefreshingContext(843) |2020-04-15 23:23:18,967| Done refreshing Context
  195. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:30,477| In method UserService.saveRole. Arguments: Role=Privilege Level: Full,
  196. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:30,488| Exiting method saveRole
  197. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:30,530| In method UserService.saveRole. Arguments: Role=Privilege Level: High,
  198. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:30,537| Exiting method saveRole
  199. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:30,866| In method MetadataSharingService.purgePreviousAssessments. Arguments:
  200. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:30,878| Exiting method purgePreviousAssessments
  201. INFO - BaseCsvLoader.loadCsvFiles(75) |2020-04-15 23:23:30,983| Attempting to process 1 CSV lines that have not been processed yet...
  202. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:31,015| In method EncounterService.saveEncounterType. Arguments: EncounterType=EncounterType[hashCode=f025511d,uuid=2658d24d-e601-4e20-8ccb-58a2d9ea6303],
  203. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:31,039| Exiting method saveEncounterType
  204. INFO - BaseCsvLoader.loadCsvFiles(84) |2020-04-15 23:23:31,042| encountertypes.csv ('encountertypes' domain) was entirely successfully processed.
  205. INFO - BaseCsvLoader.loadCsvFiles(86) |2020-04-15 23:23:31,043| 1 entities were saved.
  206. Security framework of XStream not initialized, XStream is probably vulnerable.
  207. INFO - GlobalPropertiesLoader.load(51) |2020-04-15 23:23:31,184| The global properties config. file has been processed: globalproperties.xml
  208. INFO - GlobalPropertiesLoader.load(61) |2020-04-15 23:23:31,186| Saving the global properties.
  209. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:31,229| In method AdministrationService.saveGlobalProperties. Arguments: List=[property: appointmentschedulingui.started value: false, property: atlas.stopAskingToConfigure value: true, property: attachments.started value: false, property: metadatamapping.addLocalMappings value: true, property: ciel.conceptsVersion value: 20200318, property: metadatamapping.localConceptSourceUuid value: 21ADDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD],
  210. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:31,234| In method AdministrationService.saveGlobalProperty. Arguments: GlobalProperty=property: appointmentschedulingui.started value: false,
  211. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:31,239| Exiting method saveGlobalProperty
  212. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:31,241| In method AdministrationService.saveGlobalProperty. Arguments: GlobalProperty=property: atlas.stopAskingToConfigure value: true,
  213. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:31,245| Exiting method saveGlobalProperty
  214. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:31,247| In method AdministrationService.saveGlobalProperty. Arguments: GlobalProperty=property: attachments.started value: false,
  215. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:31,250| Exiting method saveGlobalProperty
  216. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:31,252| In method AdministrationService.saveGlobalProperty. Arguments: GlobalProperty=property: metadatamapping.addLocalMappings value: true,
  217. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:31,255| Exiting method saveGlobalProperty
  218. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:31,257| In method AdministrationService.saveGlobalProperty. Arguments: GlobalProperty=property: ciel.conceptsVersion value: 20200318,
  219. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:31,260| Exiting method saveGlobalProperty
  220. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:31,263| In method AdministrationService.saveGlobalProperty. Arguments: GlobalProperty=property: metadatamapping.localConceptSourceUuid value: 21ADDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD,
  221. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:31,267| Exiting method saveGlobalProperty
  222. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:31,304| Exiting method saveGlobalProperties
  223. INFO - BaseCsvLoader.loadCsvFiles(75) |2020-04-15 23:23:31,324| Attempting to process 2 CSV lines that have not been processed yet...
  224. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:31,413| In method LocationService.saveLocation. Arguments: Location=Indianapolis Convention Center,
  225. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:31,435| Exiting method saveLocation
  226. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:31,486| In method LocationService.saveLocation. Arguments: Location=Indianapolis Fairground Clinic,
  227. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:31,513| Exiting method saveLocation
  228. INFO - BaseCsvLoader.loadCsvFiles(84) |2020-04-15 23:23:31,515| locations.csv ('locations' domain) was entirely successfully processed.
  229. INFO - BaseCsvLoader.loadCsvFiles(86) |2020-04-15 23:23:31,517| 2 entities were saved.
  230. INFO - BaseCsvLoader.loadCsvFiles(75) |2020-04-15 23:23:31,548| Attempting to process 29 CSV lines that have not been processed yet...
  231. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:31,600| In method ConceptService.saveConceptClass. Arguments: ConceptClass=ConceptClass[hashCode=5c28ff4,uuid=8d4907b2-c2cc-11de-8d13-0010c6dffd0f],
  232. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:31,616| Exiting method saveConceptClass
  233. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:31,633| In method ConceptService.saveConceptClass. Arguments: ConceptClass=ConceptClass[hashCode=de2eaa5d,uuid=8d490bf4-c2cc-11de-8d13-0010c6dffd0f],
  234. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:31,645| Exiting method saveConceptClass
  235. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:31,672| In method ConceptService.saveConceptClass. Arguments: ConceptClass=ConceptClass[hashCode=9dab2e8e,uuid=8d490dfc-c2cc-11de-8d13-0010c6dffd0f],
  236. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:31,690| Exiting method saveConceptClass
  237. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:31,707| In method ConceptService.saveConceptClass. Arguments: ConceptClass=ConceptClass[hashCode=503bcf12,uuid=8d4918b0-c2cc-11de-8d13-0010c6dffd0f],
  238. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:31,729| Exiting method saveConceptClass
  239. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:31,751| In method ConceptService.saveConceptClass. Arguments: ConceptClass=ConceptClass[hashCode=762721b5,uuid=8d491a9a-c2cc-11de-8d13-0010c6dffd0f],
  240. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:31,770| Exiting method saveConceptClass
  241. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:31,792| In method ConceptService.saveConceptClass. Arguments: ConceptClass=ConceptClass[hashCode=9e9f5af9,uuid=8d491c7a-c2cc-11de-8d13-0010c6dffd0f],
  242. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:31,817| Exiting method saveConceptClass
  243. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:31,833| In method ConceptService.saveConceptClass. Arguments: ConceptClass=ConceptClass[hashCode=deccd78c,uuid=8d491e50-c2cc-11de-8d13-0010c6dffd0f],
  244. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:31,855| Exiting method saveConceptClass
  245. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:31,876| In method ConceptService.saveConceptClass. Arguments: ConceptClass=ConceptClass[hashCode=8a4fa1f,uuid=8d492026-c2cc-11de-8d13-0010c6dffd0f],
  246. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:31,890| Exiting method saveConceptClass
  247. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:31,907| In method ConceptService.saveConceptClass. Arguments: ConceptClass=ConceptClass[hashCode=151fb7b0,uuid=8d4923b4-c2cc-11de-8d13-0010c6dffd0f],
  248. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:31,925| Exiting method saveConceptClass
  249. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:31,947| In method ConceptService.saveConceptClass. Arguments: ConceptClass=ConceptClass[hashCode=2349cbbb,uuid=8d492594-c2cc-11de-8d13-0010c6dffd0f],
  250. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:31,966| Exiting method saveConceptClass
  251. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:31,990| In method ConceptService.saveConceptClass. Arguments: ConceptClass=ConceptClass[hashCode=4bc204ff,uuid=8d492774-c2cc-11de-8d13-0010c6dffd0f],
  252. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:32,006| Exiting method saveConceptClass
  253. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:32,024| In method ConceptService.saveConceptClass. Arguments: ConceptClass=ConceptClass[hashCode=743a3e43,uuid=8d492954-c2cc-11de-8d13-0010c6dffd0f],
  254. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:32,063| Exiting method saveConceptClass
  255. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:32,079| In method ConceptService.saveConceptClass. Arguments: ConceptClass=ConceptClass[hashCode=e87787c,uuid=8d492b2a-c2cc-11de-8d13-0010c6dffd0f],
  256. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:32,091| Exiting method saveConceptClass
  257. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:32,114| In method ConceptService.saveConceptClass. Arguments: ConceptClass=ConceptClass[hashCode=36ffb1c0,uuid=8d492d0a-c2cc-11de-8d13-0010c6dffd0f],
  258. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:32,132| Exiting method saveConceptClass
  259. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:32,156| In method ConceptService.saveConceptClass. Arguments: ConceptClass=ConceptClass[hashCode=875d453b,uuid=8d492ee0-c2cc-11de-8d13-0010c6dffd0f],
  260. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:32,172| Exiting method saveConceptClass
  261. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:32,206| In method ConceptService.saveConceptClass. Arguments: ConceptClass=ConceptClass[hashCode=26f7da60,uuid=1edca11a-768a-102f-83f4-12313b04a615],
  262. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:32,228| Exiting method saveConceptClass
  263. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:32,257| In method ConceptService.saveConceptClass. Arguments: ConceptClass=ConceptClass[hashCode=8fd9c2e1,uuid=1edca23c-768a-102f-83f4-12313b04a615],
  264. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:32,276| Exiting method saveConceptClass
  265. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:32,312| In method ConceptService.saveConceptClass. Arguments: ConceptClass=ConceptClass[hashCode=b65d2c54,uuid=1edca368-768a-102f-83f4-12313b04a615],
  266. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:32,340| Exiting method saveConceptClass
  267. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:32,365| In method ConceptService.saveConceptClass. Arguments: ConceptClass=ConceptClass[hashCode=ba2d6c4d,uuid=801e5b58-a14e-4a71-859d-23310b0f2f91],
  268. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:32,375| Exiting method saveConceptClass
  269. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:32,402| In method ConceptService.saveConceptClass. Arguments: ConceptClass=ConceptClass[hashCode=302a3077,uuid=896d8b8c-603b-421f-959e-8d305cbeeb82],
  270. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:32,426| Exiting method saveConceptClass
  271. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:32,450| In method ConceptService.saveConceptClass. Arguments: ConceptClass=ConceptClass[hashCode=3ce7830c,uuid=99ac2869-6615-4466-810b-8eb54544486a],
  272. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:32,474| Exiting method saveConceptClass
  273. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:32,505| In method ConceptService.saveConceptClass. Arguments: ConceptClass=ConceptClass[hashCode=8bab0648,uuid=8caa332c-efe4-4025-8b18-3398328e1323],
  274. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:32,520| Exiting method saveConceptClass
  275. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:32,539| In method ConceptService.saveConceptClass. Arguments: ConceptClass=ConceptClass[hashCode=a7612e8c,uuid=8e071bfe-520c-44c0-a89b-538e9129b42a],
  276. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:32,560| Exiting method saveConceptClass
  277. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:32,582| In method ConceptService.saveConceptClass. Arguments: ConceptClass=ConceptClass[hashCode=275ccddc,uuid=b4535251-9183-4175-959e-9ee67dc71e78],
  278. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:32,606| Exiting method saveConceptClass
  279. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:32,639| In method ConceptService.saveConceptClass. Arguments: ConceptClass=ConceptClass[hashCode=5cd3e89,uuid=e30d8601-07f8-413a-9d11-cdfbb28196ec],
  280. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:32,661| Exiting method saveConceptClass
  281. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:32,695| In method ConceptService.saveConceptClass. Arguments: ConceptClass=ConceptClass[hashCode=5be39fa3,uuid=89a98300-062e-4003-8f6f-764ea23ab648],
  282. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:32,712| Exiting method saveConceptClass
  283. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:32,740| In method ConceptService.saveConceptClass. Arguments: ConceptClass=ConceptClass[hashCode=61d407a6,uuid=de359f23-2bfc-4e8d-96d8-25b7526d6070],
  284. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:32,765| Exiting method saveConceptClass
  285. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:32,791| In method ConceptService.saveConceptClass. Arguments: ConceptClass=ConceptClass[hashCode=388a8a4,uuid=0dcf23d4-3008-4d8e-b12c-4ec95d1cfd97],
  286. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:32,813| Exiting method saveConceptClass
  287. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:32,849| In method ConceptService.saveConceptClass. Arguments: ConceptClass=ConceptClass[hashCode=bac57a6,uuid=e2c52f55-c7b4-49f7-9f82-1ffa2fe6023f],
  288. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:32,868| Exiting method saveConceptClass
  289. INFO - BaseCsvLoader.loadCsvFiles(84) |2020-04-15 23:23:32,870| conceptclasses.csv ('conceptclasses' domain) was entirely successfully processed.
  290. INFO - BaseCsvLoader.loadCsvFiles(86) |2020-04-15 23:23:32,871| 29 entities were saved.
  291. INFO - BaseCsvLoader.loadCsvFiles(75) |2020-04-15 23:23:33,132| Attempting to process 60 CSV lines that have not been processed yet...
  292. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:33,184| No concept found for 'CIEL:1065'
  293. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:33,220| No concept found for 'CIEL:1066'
  294. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:33,255| No concept found for 'CIEL:1067'
  295. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:33,328| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  296. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:33,404| Exiting method saveConcept
  297. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:33,434| No concept found for 'CIEL:1065'
  298. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:33,469| No concept found for 'CIEL:1066'
  299. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:33,499| No concept found for 'CIEL:1067'
  300. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:33,525| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  301. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:33,606| Exiting method saveConcept
  302. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:33,637| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  303. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:33,702| Exiting method saveConcept
  304. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:33,745| No concept found for 'CIEL:163468'
  305. ERROR - CsvParser.process(211) |2020-04-15 23:23:33,731| An OpenMRS object could not be constructed or saved from the following CSV line:
  306. [57b762ca-0ea8-4e86-9449-18c58a651cf3, SARS-CoV-2 Occupational Exposure, null, Any exposures to SARS-CoV-2 related to the patient's occupation, Question, Coded, CIEL:163468;CIEL:5619;987a7256-ed27-4747-b9cc-c46472dd2a3c, null, null, null]
  307. java.lang.IllegalArgumentException: The object identified by 'CIEL:163468' could not be found in database. The parent or encompassing object referencing the following list was therefore not created/updated: [CIEL:163468;CIEL:5619;987a7256-ed27-4747-b9cc-c46472dd2a3c].
  308. at org.openmrs.module.initializer.api.utils.ListParser.parseList(ListParser.java:63)
  309. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:38)
  310. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:14)
  311. at org.openmrs.module.initializer.api.CsvParser.createInstance(CsvParser.java:253)
  312. at org.openmrs.module.initializer.api.CsvParser.process(CsvParser.java:201)
  313. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.loadCsvFiles(BaseCsvLoader.java:77)
  314. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.load(BaseCsvLoader.java:33)
  315. at org.openmrs.module.initializer.InitializerActivator.started(InitializerActivator.java:33)
  316. at org.openmrs.module.ModuleUtil.refreshApplicationContext(ModuleUtil.java:931)
  317. at org.openmrs.module.web.WebModuleUtil.refreshWAC(WebModuleUtil.java:847)
  318. at org.openmrs.module.web.WebModuleUtil.startModule(WebModuleUtil.java:312)
  319. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:94)
  320. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:89)
  321. at org.openmrs.module.webservices.rest.web.v1_0.resource.openmrs1_8.ModuleResource1_8.upload(ModuleResource1_8.java:187)
  322. at org.openmrs.module.webservices.rest.web.v1_0.controller.MainResourceController.upload(MainResourceController.java:104)
  323. at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
  324. at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
  325. at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
  326. at java.lang.reflect.Method.invoke(Method.java:498)
  327. at org.springframework.web.bind.annotation.support.HandlerMethodInvoker.invokeHandlerMethod(HandlerMethodInvoker.java:177)
  328. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.invokeHandlerMethod(AnnotationMethodHandlerAdapter.java:446)
  329. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.handle(AnnotationMethodHandlerAdapter.java:434)
  330. at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:943)
  331. at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:877)
  332. at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:966)
  333. at org.springframework.web.servlet.FrameworkServlet.doPost(FrameworkServlet.java:868)
  334. at javax.servlet.http.HttpServlet.service(HttpServlet.java:650)
  335. at org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:842)
  336. at javax.servlet.http.HttpServlet.service(HttpServlet.java:731)
  337. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:303)
  338. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  339. at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52)
  340. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  341. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  342. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:73)
  343. at org.openmrs.web.filter.GZIPFilter.doFilterInternal(GZIPFilter.java:65)
  344. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  345. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  346. at org.openmrs.module.webservices.rest.web.filter.AuthorizationFilter.doFilter(AuthorizationFilter.java:105)
  347. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  348. at org.openmrs.module.webservices.rest.web.filter.ContentTypeFilter.doFilter(ContentTypeFilter.java:64)
  349. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  350. at org.springframework.web.filter.ShallowEtagHeaderFilter.doFilterInternal(ShallowEtagHeaderFilter.java:82)
  351. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  352. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  353. at org.openmrs.module.owa.filter.OwaFilter.doFilter(OwaFilter.java:57)
  354. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  355. at org.openmrs.module.referenceapplication.filter.RequireLoginLocationFilter.doFilter(RequireLoginLocationFilter.java:93)
  356. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  357. at org.openmrs.module.web.filter.ModuleFilter.doFilter(ModuleFilter.java:57)
  358. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  359. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  360. at org.openmrs.web.filter.OpenmrsFilter.doFilterInternal(OpenmrsFilter.java:109)
  361. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  362. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  363. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  364. at org.springframework.orm.hibernate4.support.OpenSessionInViewFilter.doFilterInternal(OpenSessionInViewFilter.java:150)
  365. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  366. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  367. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  368. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  369. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  370. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  371. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  372. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  373. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  374. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  375. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  376. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  377. at org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:88)
  378. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  379. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  380. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  381. at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:219)
  382. at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:110)
  383. at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:494)
  384. at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:169)
  385. at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:104)
  386. at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:1025)
  387. at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:116)
  388. at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:445)
  389. at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1137)
  390. at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:637)
  391. at org.apache.tomcat.util.net.AprEndpoint$SocketWithOptionsProcessor.run(AprEndpoint.java:2512)
  392. at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
  393. at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
  394. at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
  395. at java.lang.Thread.run(Thread.java:748)
  396. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:33,791| No concept found for 'CIEL:165833'
  397. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:33,816| No concept found for 'CIEL:165850'
  398. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:33,841| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  399. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:33,906| Exiting method saveConcept
  400. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:33,973| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  401. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:34,069| Exiting method saveConcept
  402. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:34,102| No concept found for 'CIEL:117277'
  403. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:34,133| No concept found for 'CIEL:119481'
  404. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:34,159| No concept found for 'CIEL:6032'
  405. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:34,179| No concept found for 'CIEL:6033'
  406. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:34,219| No concept found for 'CIEL:165646'
  407. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:34,243| No concept found for 'CIEL:116031'
  408. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:34,267| No concept found for 'CIEL:121375'
  409. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:34,303| No concept found for 'CIEL:155569'
  410. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:34,330| No concept found for 'CIEL:119270'
  411. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:34,352| No concept found for 'CIEL:5016'
  412. ERROR - CsvParser.process(211) |2020-04-15 23:23:34,372| An OpenMRS object could not be constructed or saved from the following CSV line:
  413. [f3f0fdd4-632d-4998-9637-1a32c02a4512, PROBLEM LIST - COVID, null, null, Diagnosis, Coded, CIEL:117277;CIEL:119481;CIEL:6032;CIEL:6033;CIEL:165646;CIEL:116031;CIEL:121375;CIEL:155569;CIEL:119270;CIEL:5016;CIEL:117399;CIEL:155;CIEL:134337;CIEL:145439;CIEL:5622;CIEL:1295;CIEL:111103;CIEL:119910, null, null, null]
  414. java.lang.IllegalArgumentException: The object identified by 'CIEL:5016' could not be found in database. The parent or encompassing object referencing the following list was therefore not created/updated: [CIEL:117277;CIEL:119481;CIEL:6032;CIEL:6033;CIEL:165646;CIEL:116031;CIEL:121375;CIEL:155569;CIEL:119270;CIEL:5016;CIEL:117399;CIEL:155;CIEL:134337;CIEL:145439;CIEL:5622;CIEL:1295;CIEL:111103;CIEL:119910].
  415. at org.openmrs.module.initializer.api.utils.ListParser.parseList(ListParser.java:63)
  416. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:38)
  417. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:14)
  418. at org.openmrs.module.initializer.api.CsvParser.createInstance(CsvParser.java:253)
  419. at org.openmrs.module.initializer.api.CsvParser.process(CsvParser.java:201)
  420. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.loadCsvFiles(BaseCsvLoader.java:77)
  421. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.load(BaseCsvLoader.java:33)
  422. at org.openmrs.module.initializer.InitializerActivator.started(InitializerActivator.java:33)
  423. at org.openmrs.module.ModuleUtil.refreshApplicationContext(ModuleUtil.java:931)
  424. at org.openmrs.module.web.WebModuleUtil.refreshWAC(WebModuleUtil.java:847)
  425. at org.openmrs.module.web.WebModuleUtil.startModule(WebModuleUtil.java:312)
  426. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:94)
  427. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:89)
  428. at org.openmrs.module.webservices.rest.web.v1_0.resource.openmrs1_8.ModuleResource1_8.upload(ModuleResource1_8.java:187)
  429. at org.openmrs.module.webservices.rest.web.v1_0.controller.MainResourceController.upload(MainResourceController.java:104)
  430. at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
  431. at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
  432. at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
  433. at java.lang.reflect.Method.invoke(Method.java:498)
  434. at org.springframework.web.bind.annotation.support.HandlerMethodInvoker.invokeHandlerMethod(HandlerMethodInvoker.java:177)
  435. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.invokeHandlerMethod(AnnotationMethodHandlerAdapter.java:446)
  436. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.handle(AnnotationMethodHandlerAdapter.java:434)
  437. at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:943)
  438. at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:877)
  439. at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:966)
  440. at org.springframework.web.servlet.FrameworkServlet.doPost(FrameworkServlet.java:868)
  441. at javax.servlet.http.HttpServlet.service(HttpServlet.java:650)
  442. at org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:842)
  443. at javax.servlet.http.HttpServlet.service(HttpServlet.java:731)
  444. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:303)
  445. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  446. at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52)
  447. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  448. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  449. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:73)
  450. at org.openmrs.web.filter.GZIPFilter.doFilterInternal(GZIPFilter.java:65)
  451. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  452. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  453. at org.openmrs.module.webservices.rest.web.filter.AuthorizationFilter.doFilter(AuthorizationFilter.java:105)
  454. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  455. at org.openmrs.module.webservices.rest.web.filter.ContentTypeFilter.doFilter(ContentTypeFilter.java:64)
  456. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  457. at org.springframework.web.filter.ShallowEtagHeaderFilter.doFilterInternal(ShallowEtagHeaderFilter.java:82)
  458. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  459. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  460. at org.openmrs.module.owa.filter.OwaFilter.doFilter(OwaFilter.java:57)
  461. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  462. at org.openmrs.module.referenceapplication.filter.RequireLoginLocationFilter.doFilter(RequireLoginLocationFilter.java:93)
  463. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  464. at org.openmrs.module.web.filter.ModuleFilter.doFilter(ModuleFilter.java:57)
  465. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  466. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  467. at org.openmrs.web.filter.OpenmrsFilter.doFilterInternal(OpenmrsFilter.java:109)
  468. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  469. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  470. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  471. at org.springframework.orm.hibernate4.support.OpenSessionInViewFilter.doFilterInternal(OpenSessionInViewFilter.java:150)
  472. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  473. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  474. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  475. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  476. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  477. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  478. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  479. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  480. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  481. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  482. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  483. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  484. at org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:88)
  485. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  486. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  487. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  488. at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:219)
  489. at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:110)
  490. at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:494)
  491. at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:169)
  492. at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:104)
  493. at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:1025)
  494. at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:116)
  495. at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:445)
  496. at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1137)
  497. at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:637)
  498. at org.apache.tomcat.util.net.AprEndpoint$SocketWithOptionsProcessor.run(AprEndpoint.java:2512)
  499. at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
  500. at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
  501. at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
  502. at java.lang.Thread.run(Thread.java:748)
  503. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:34,413| No concept found for 'CIEL:5226'
  504. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:34,441| No concept found for 'CIEL:140238'
  505. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:34,473| No concept found for 'CIEL:140471'
  506. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:34,496| No concept found for 'CIEL:871'
  507. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:34,532| No concept found for 'CIEL:121'
  508. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:34,564| No concept found for 'CIEL:165501'
  509. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:34,589| No concept found for 'CIEL:158843'
  510. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:34,618| No concept found for 'CIEL:143264'
  511. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:34,646| No concept found for 'CIEL:141600'
  512. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:34,667| No concept found for 'CIEL:120749'
  513. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:34,701| No concept found for 'CIEL:139084'
  514. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:34,727| No concept found for 'CIEL:133473'
  515. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:34,751| No concept found for 'CIEL:142412'
  516. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:34,784| No concept found for 'CIEL:151'
  517. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:34,807| No concept found for 'CIEL:5622'
  518. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:34,860| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  519. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:35,019| Exiting method saveConcept
  520. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:35,052| No concept found for 'CIEL:5226'
  521. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:35,081| No concept found for 'CIEL:140238'
  522. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:35,124| No concept found for 'CIEL:140471'
  523. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:35,160| No concept found for 'CIEL:871'
  524. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:35,185| No concept found for 'CIEL:121'
  525. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:35,206| No concept found for 'CIEL:165501'
  526. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:35,237| No concept found for 'CIEL:158843'
  527. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:35,265| No concept found for 'CIEL:143264'
  528. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:35,308| No concept found for 'CIEL:141600'
  529. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:35,332| No concept found for 'CIEL:120749'
  530. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:35,358| No concept found for 'CIEL:139084'
  531. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:35,382| No concept found for 'CIEL:133473'
  532. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:35,405| No concept found for 'CIEL:142412'
  533. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:35,434| No concept found for 'CIEL:151'
  534. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:35,459| No concept found for 'CIEL:5622'
  535. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:35,486| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  536. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:35,576| Exiting method saveConcept
  537. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:35,602| No concept found for 'CIEL:1115'
  538. ERROR - CsvParser.process(211) |2020-04-15 23:23:35,618| An OpenMRS object could not be constructed or saved from the following CSV line:
  539. [29ed77d2-acd8-4095-b54c-38397b77adb4, GENERAL EXAM FINDINGS - COVID, null, null, Finding, Coded, CIEL:1115;CIEL:1116, null, null, null]
  540. java.lang.IllegalArgumentException: The object identified by 'CIEL:1115' could not be found in database. The parent or encompassing object referencing the following list was therefore not created/updated: [CIEL:1115;CIEL:1116].
  541. at org.openmrs.module.initializer.api.utils.ListParser.parseList(ListParser.java:63)
  542. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:38)
  543. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:14)
  544. at org.openmrs.module.initializer.api.CsvParser.createInstance(CsvParser.java:253)
  545. at org.openmrs.module.initializer.api.CsvParser.process(CsvParser.java:201)
  546. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.loadCsvFiles(BaseCsvLoader.java:77)
  547. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.load(BaseCsvLoader.java:33)
  548. at org.openmrs.module.initializer.InitializerActivator.started(InitializerActivator.java:33)
  549. at org.openmrs.module.ModuleUtil.refreshApplicationContext(ModuleUtil.java:931)
  550. at org.openmrs.module.web.WebModuleUtil.refreshWAC(WebModuleUtil.java:847)
  551. at org.openmrs.module.web.WebModuleUtil.startModule(WebModuleUtil.java:312)
  552. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:94)
  553. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:89)
  554. at org.openmrs.module.webservices.rest.web.v1_0.resource.openmrs1_8.ModuleResource1_8.upload(ModuleResource1_8.java:187)
  555. at org.openmrs.module.webservices.rest.web.v1_0.controller.MainResourceController.upload(MainResourceController.java:104)
  556. at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
  557. at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
  558. at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
  559. at java.lang.reflect.Method.invoke(Method.java:498)
  560. at org.springframework.web.bind.annotation.support.HandlerMethodInvoker.invokeHandlerMethod(HandlerMethodInvoker.java:177)
  561. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.invokeHandlerMethod(AnnotationMethodHandlerAdapter.java:446)
  562. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.handle(AnnotationMethodHandlerAdapter.java:434)
  563. at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:943)
  564. at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:877)
  565. at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:966)
  566. at org.springframework.web.servlet.FrameworkServlet.doPost(FrameworkServlet.java:868)
  567. at javax.servlet.http.HttpServlet.service(HttpServlet.java:650)
  568. at org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:842)
  569. at javax.servlet.http.HttpServlet.service(HttpServlet.java:731)
  570. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:303)
  571. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  572. at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52)
  573. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  574. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  575. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:73)
  576. at org.openmrs.web.filter.GZIPFilter.doFilterInternal(GZIPFilter.java:65)
  577. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  578. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  579. at org.openmrs.module.webservices.rest.web.filter.AuthorizationFilter.doFilter(AuthorizationFilter.java:105)
  580. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  581. at org.openmrs.module.webservices.rest.web.filter.ContentTypeFilter.doFilter(ContentTypeFilter.java:64)
  582. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  583. at org.springframework.web.filter.ShallowEtagHeaderFilter.doFilterInternal(ShallowEtagHeaderFilter.java:82)
  584. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  585. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  586. at org.openmrs.module.owa.filter.OwaFilter.doFilter(OwaFilter.java:57)
  587. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  588. at org.openmrs.module.referenceapplication.filter.RequireLoginLocationFilter.doFilter(RequireLoginLocationFilter.java:93)
  589. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  590. at org.openmrs.module.web.filter.ModuleFilter.doFilter(ModuleFilter.java:57)
  591. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  592. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  593. at org.openmrs.web.filter.OpenmrsFilter.doFilterInternal(OpenmrsFilter.java:109)
  594. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  595. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  596. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  597. at org.springframework.orm.hibernate4.support.OpenSessionInViewFilter.doFilterInternal(OpenSessionInViewFilter.java:150)
  598. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  599. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  600. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  601. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  602. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  603. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  604. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  605. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  606. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  607. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  608. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  609. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  610. at org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:88)
  611. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  612. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  613. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  614. at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:219)
  615. at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:110)
  616. at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:494)
  617. at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:169)
  618. at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:104)
  619. at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:1025)
  620. at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:116)
  621. at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:445)
  622. at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1137)
  623. at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:637)
  624. at org.apache.tomcat.util.net.AprEndpoint$SocketWithOptionsProcessor.run(AprEndpoint.java:2512)
  625. at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
  626. at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
  627. at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
  628. at java.lang.Thread.run(Thread.java:748)
  629. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:35,663| No concept found for 'CIEL:1115'
  630. ERROR - CsvParser.process(211) |2020-04-15 23:23:35,680| An OpenMRS object could not be constructed or saved from the following CSV line:
  631. [c9672fb7-83b8-4543-a8c9-3e5ad8b4a58c, HEENT exam findings - COVID, null, null, Finding, Coded, CIEL:1115;CIEL:1116, null, null, null]
  632. java.lang.IllegalArgumentException: The object identified by 'CIEL:1115' could not be found in database. The parent or encompassing object referencing the following list was therefore not created/updated: [CIEL:1115;CIEL:1116].
  633. at org.openmrs.module.initializer.api.utils.ListParser.parseList(ListParser.java:63)
  634. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:38)
  635. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:14)
  636. at org.openmrs.module.initializer.api.CsvParser.createInstance(CsvParser.java:253)
  637. at org.openmrs.module.initializer.api.CsvParser.process(CsvParser.java:201)
  638. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.loadCsvFiles(BaseCsvLoader.java:77)
  639. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.load(BaseCsvLoader.java:33)
  640. at org.openmrs.module.initializer.InitializerActivator.started(InitializerActivator.java:33)
  641. at org.openmrs.module.ModuleUtil.refreshApplicationContext(ModuleUtil.java:931)
  642. at org.openmrs.module.web.WebModuleUtil.refreshWAC(WebModuleUtil.java:847)
  643. at org.openmrs.module.web.WebModuleUtil.startModule(WebModuleUtil.java:312)
  644. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:94)
  645. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:89)
  646. at org.openmrs.module.webservices.rest.web.v1_0.resource.openmrs1_8.ModuleResource1_8.upload(ModuleResource1_8.java:187)
  647. at org.openmrs.module.webservices.rest.web.v1_0.controller.MainResourceController.upload(MainResourceController.java:104)
  648. at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
  649. at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
  650. at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
  651. at java.lang.reflect.Method.invoke(Method.java:498)
  652. at org.springframework.web.bind.annotation.support.HandlerMethodInvoker.invokeHandlerMethod(HandlerMethodInvoker.java:177)
  653. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.invokeHandlerMethod(AnnotationMethodHandlerAdapter.java:446)
  654. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.handle(AnnotationMethodHandlerAdapter.java:434)
  655. at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:943)
  656. at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:877)
  657. at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:966)
  658. at org.springframework.web.servlet.FrameworkServlet.doPost(FrameworkServlet.java:868)
  659. at javax.servlet.http.HttpServlet.service(HttpServlet.java:650)
  660. at org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:842)
  661. at javax.servlet.http.HttpServlet.service(HttpServlet.java:731)
  662. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:303)
  663. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  664. at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52)
  665. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  666. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  667. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:73)
  668. at org.openmrs.web.filter.GZIPFilter.doFilterInternal(GZIPFilter.java:65)
  669. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  670. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  671. at org.openmrs.module.webservices.rest.web.filter.AuthorizationFilter.doFilter(AuthorizationFilter.java:105)
  672. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  673. at org.openmrs.module.webservices.rest.web.filter.ContentTypeFilter.doFilter(ContentTypeFilter.java:64)
  674. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  675. at org.springframework.web.filter.ShallowEtagHeaderFilter.doFilterInternal(ShallowEtagHeaderFilter.java:82)
  676. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  677. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  678. at org.openmrs.module.owa.filter.OwaFilter.doFilter(OwaFilter.java:57)
  679. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  680. at org.openmrs.module.referenceapplication.filter.RequireLoginLocationFilter.doFilter(RequireLoginLocationFilter.java:93)
  681. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  682. at org.openmrs.module.web.filter.ModuleFilter.doFilter(ModuleFilter.java:57)
  683. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  684. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  685. at org.openmrs.web.filter.OpenmrsFilter.doFilterInternal(OpenmrsFilter.java:109)
  686. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  687. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  688. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  689. at org.springframework.orm.hibernate4.support.OpenSessionInViewFilter.doFilterInternal(OpenSessionInViewFilter.java:150)
  690. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  691. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  692. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  693. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  694. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  695. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  696. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  697. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  698. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  699. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  700. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  701. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  702. at org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:88)
  703. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  704. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  705. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  706. at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:219)
  707. at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:110)
  708. at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:494)
  709. at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:169)
  710. at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:104)
  711. at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:1025)
  712. at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:116)
  713. at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:445)
  714. at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1137)
  715. at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:637)
  716. at org.apache.tomcat.util.net.AprEndpoint$SocketWithOptionsProcessor.run(AprEndpoint.java:2512)
  717. at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
  718. at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
  719. at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
  720. at java.lang.Thread.run(Thread.java:748)
  721. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:35,735| No concept found for 'CIEL:1115'
  722. ERROR - CsvParser.process(211) |2020-04-15 23:23:35,752| An OpenMRS object could not be constructed or saved from the following CSV line:
  723. [b68e2c76-c218-48b2-9164-246b3f6a0dc8, Pulmonary exam findings - COVID, null, null, Finding, Coded, CIEL:1115;CIEL:1116, null, null, null]
  724. java.lang.IllegalArgumentException: The object identified by 'CIEL:1115' could not be found in database. The parent or encompassing object referencing the following list was therefore not created/updated: [CIEL:1115;CIEL:1116].
  725. at org.openmrs.module.initializer.api.utils.ListParser.parseList(ListParser.java:63)
  726. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:38)
  727. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:14)
  728. at org.openmrs.module.initializer.api.CsvParser.createInstance(CsvParser.java:253)
  729. at org.openmrs.module.initializer.api.CsvParser.process(CsvParser.java:201)
  730. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.loadCsvFiles(BaseCsvLoader.java:77)
  731. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.load(BaseCsvLoader.java:33)
  732. at org.openmrs.module.initializer.InitializerActivator.started(InitializerActivator.java:33)
  733. at org.openmrs.module.ModuleUtil.refreshApplicationContext(ModuleUtil.java:931)
  734. at org.openmrs.module.web.WebModuleUtil.refreshWAC(WebModuleUtil.java:847)
  735. at org.openmrs.module.web.WebModuleUtil.startModule(WebModuleUtil.java:312)
  736. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:94)
  737. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:89)
  738. at org.openmrs.module.webservices.rest.web.v1_0.resource.openmrs1_8.ModuleResource1_8.upload(ModuleResource1_8.java:187)
  739. at org.openmrs.module.webservices.rest.web.v1_0.controller.MainResourceController.upload(MainResourceController.java:104)
  740. at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
  741. at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
  742. at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
  743. at java.lang.reflect.Method.invoke(Method.java:498)
  744. at org.springframework.web.bind.annotation.support.HandlerMethodInvoker.invokeHandlerMethod(HandlerMethodInvoker.java:177)
  745. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.invokeHandlerMethod(AnnotationMethodHandlerAdapter.java:446)
  746. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.handle(AnnotationMethodHandlerAdapter.java:434)
  747. at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:943)
  748. at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:877)
  749. at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:966)
  750. at org.springframework.web.servlet.FrameworkServlet.doPost(FrameworkServlet.java:868)
  751. at javax.servlet.http.HttpServlet.service(HttpServlet.java:650)
  752. at org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:842)
  753. at javax.servlet.http.HttpServlet.service(HttpServlet.java:731)
  754. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:303)
  755. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  756. at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52)
  757. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  758. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  759. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:73)
  760. at org.openmrs.web.filter.GZIPFilter.doFilterInternal(GZIPFilter.java:65)
  761. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  762. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  763. at org.openmrs.module.webservices.rest.web.filter.AuthorizationFilter.doFilter(AuthorizationFilter.java:105)
  764. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  765. at org.openmrs.module.webservices.rest.web.filter.ContentTypeFilter.doFilter(ContentTypeFilter.java:64)
  766. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  767. at org.springframework.web.filter.ShallowEtagHeaderFilter.doFilterInternal(ShallowEtagHeaderFilter.java:82)
  768. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  769. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  770. at org.openmrs.module.owa.filter.OwaFilter.doFilter(OwaFilter.java:57)
  771. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  772. at org.openmrs.module.referenceapplication.filter.RequireLoginLocationFilter.doFilter(RequireLoginLocationFilter.java:93)
  773. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  774. at org.openmrs.module.web.filter.ModuleFilter.doFilter(ModuleFilter.java:57)
  775. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  776. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  777. at org.openmrs.web.filter.OpenmrsFilter.doFilterInternal(OpenmrsFilter.java:109)
  778. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  779. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  780. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  781. at org.springframework.orm.hibernate4.support.OpenSessionInViewFilter.doFilterInternal(OpenSessionInViewFilter.java:150)
  782. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  783. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  784. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  785. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  786. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  787. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  788. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  789. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  790. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  791. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  792. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  793. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  794. at org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:88)
  795. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  796. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  797. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  798. at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:219)
  799. at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:110)
  800. at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:494)
  801. at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:169)
  802. at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:104)
  803. at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:1025)
  804. at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:116)
  805. at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:445)
  806. at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1137)
  807. at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:637)
  808. at org.apache.tomcat.util.net.AprEndpoint$SocketWithOptionsProcessor.run(AprEndpoint.java:2512)
  809. at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
  810. at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
  811. at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
  812. at java.lang.Thread.run(Thread.java:748)
  813. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:35,806| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  814. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:35,865| Exiting method saveConcept
  815. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:35,903| No concept found for 'CIEL:1115'
  816. ERROR - CsvParser.process(211) |2020-04-15 23:23:35,920| An OpenMRS object could not be constructed or saved from the following CSV line:
  817. [a356cc13-9009-407f-9fb7-b51c11918edf, Abdominal exam findings - COVID, null, null, Finding, Coded, CIEL:1115;CIEL:1116, null, null, null]
  818. java.lang.IllegalArgumentException: The object identified by 'CIEL:1115' could not be found in database. The parent or encompassing object referencing the following list was therefore not created/updated: [CIEL:1115;CIEL:1116].
  819. at org.openmrs.module.initializer.api.utils.ListParser.parseList(ListParser.java:63)
  820. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:38)
  821. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:14)
  822. at org.openmrs.module.initializer.api.CsvParser.createInstance(CsvParser.java:253)
  823. at org.openmrs.module.initializer.api.CsvParser.process(CsvParser.java:201)
  824. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.loadCsvFiles(BaseCsvLoader.java:77)
  825. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.load(BaseCsvLoader.java:33)
  826. at org.openmrs.module.initializer.InitializerActivator.started(InitializerActivator.java:33)
  827. at org.openmrs.module.ModuleUtil.refreshApplicationContext(ModuleUtil.java:931)
  828. at org.openmrs.module.web.WebModuleUtil.refreshWAC(WebModuleUtil.java:847)
  829. at org.openmrs.module.web.WebModuleUtil.startModule(WebModuleUtil.java:312)
  830. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:94)
  831. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:89)
  832. at org.openmrs.module.webservices.rest.web.v1_0.resource.openmrs1_8.ModuleResource1_8.upload(ModuleResource1_8.java:187)
  833. at org.openmrs.module.webservices.rest.web.v1_0.controller.MainResourceController.upload(MainResourceController.java:104)
  834. at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
  835. at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
  836. at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
  837. at java.lang.reflect.Method.invoke(Method.java:498)
  838. at org.springframework.web.bind.annotation.support.HandlerMethodInvoker.invokeHandlerMethod(HandlerMethodInvoker.java:177)
  839. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.invokeHandlerMethod(AnnotationMethodHandlerAdapter.java:446)
  840. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.handle(AnnotationMethodHandlerAdapter.java:434)
  841. at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:943)
  842. at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:877)
  843. at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:966)
  844. at org.springframework.web.servlet.FrameworkServlet.doPost(FrameworkServlet.java:868)
  845. at javax.servlet.http.HttpServlet.service(HttpServlet.java:650)
  846. at org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:842)
  847. at javax.servlet.http.HttpServlet.service(HttpServlet.java:731)
  848. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:303)
  849. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  850. at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52)
  851. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  852. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  853. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:73)
  854. at org.openmrs.web.filter.GZIPFilter.doFilterInternal(GZIPFilter.java:65)
  855. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  856. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  857. at org.openmrs.module.webservices.rest.web.filter.AuthorizationFilter.doFilter(AuthorizationFilter.java:105)
  858. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  859. at org.openmrs.module.webservices.rest.web.filter.ContentTypeFilter.doFilter(ContentTypeFilter.java:64)
  860. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  861. at org.springframework.web.filter.ShallowEtagHeaderFilter.doFilterInternal(ShallowEtagHeaderFilter.java:82)
  862. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  863. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  864. at org.openmrs.module.owa.filter.OwaFilter.doFilter(OwaFilter.java:57)
  865. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  866. at org.openmrs.module.referenceapplication.filter.RequireLoginLocationFilter.doFilter(RequireLoginLocationFilter.java:93)
  867. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  868. at org.openmrs.module.web.filter.ModuleFilter.doFilter(ModuleFilter.java:57)
  869. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  870. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  871. at org.openmrs.web.filter.OpenmrsFilter.doFilterInternal(OpenmrsFilter.java:109)
  872. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  873. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  874. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  875. at org.springframework.orm.hibernate4.support.OpenSessionInViewFilter.doFilterInternal(OpenSessionInViewFilter.java:150)
  876. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  877. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  878. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  879. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  880. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  881. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  882. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  883. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  884. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  885. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  886. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  887. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  888. at org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:88)
  889. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  890. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  891. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  892. at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:219)
  893. at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:110)
  894. at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:494)
  895. at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:169)
  896. at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:104)
  897. at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:1025)
  898. at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:116)
  899. at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:445)
  900. at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1137)
  901. at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:637)
  902. at org.apache.tomcat.util.net.AprEndpoint$SocketWithOptionsProcessor.run(AprEndpoint.java:2512)
  903. at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
  904. at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
  905. at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
  906. at java.lang.Thread.run(Thread.java:748)
  907. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:35,963| No concept found for 'CIEL:1115'
  908. ERROR - CsvParser.process(211) |2020-04-15 23:23:35,978| An OpenMRS object could not be constructed or saved from the following CSV line:
  909. [73674a9f-75fc-41ac-940c-842d321c817d, Cardiac exam findings - COVID, null, null, Finding, Coded, CIEL:1115;CIEL:1116, null, null, null]
  910. java.lang.IllegalArgumentException: The object identified by 'CIEL:1115' could not be found in database. The parent or encompassing object referencing the following list was therefore not created/updated: [CIEL:1115;CIEL:1116].
  911. at org.openmrs.module.initializer.api.utils.ListParser.parseList(ListParser.java:63)
  912. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:38)
  913. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:14)
  914. at org.openmrs.module.initializer.api.CsvParser.createInstance(CsvParser.java:253)
  915. at org.openmrs.module.initializer.api.CsvParser.process(CsvParser.java:201)
  916. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.loadCsvFiles(BaseCsvLoader.java:77)
  917. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.load(BaseCsvLoader.java:33)
  918. at org.openmrs.module.initializer.InitializerActivator.started(InitializerActivator.java:33)
  919. at org.openmrs.module.ModuleUtil.refreshApplicationContext(ModuleUtil.java:931)
  920. at org.openmrs.module.web.WebModuleUtil.refreshWAC(WebModuleUtil.java:847)
  921. at org.openmrs.module.web.WebModuleUtil.startModule(WebModuleUtil.java:312)
  922. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:94)
  923. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:89)
  924. at org.openmrs.module.webservices.rest.web.v1_0.resource.openmrs1_8.ModuleResource1_8.upload(ModuleResource1_8.java:187)
  925. at org.openmrs.module.webservices.rest.web.v1_0.controller.MainResourceController.upload(MainResourceController.java:104)
  926. at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
  927. at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
  928. at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
  929. at java.lang.reflect.Method.invoke(Method.java:498)
  930. at org.springframework.web.bind.annotation.support.HandlerMethodInvoker.invokeHandlerMethod(HandlerMethodInvoker.java:177)
  931. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.invokeHandlerMethod(AnnotationMethodHandlerAdapter.java:446)
  932. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.handle(AnnotationMethodHandlerAdapter.java:434)
  933. at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:943)
  934. at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:877)
  935. at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:966)
  936. at org.springframework.web.servlet.FrameworkServlet.doPost(FrameworkServlet.java:868)
  937. at javax.servlet.http.HttpServlet.service(HttpServlet.java:650)
  938. at org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:842)
  939. at javax.servlet.http.HttpServlet.service(HttpServlet.java:731)
  940. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:303)
  941. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  942. at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52)
  943. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  944. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  945. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:73)
  946. at org.openmrs.web.filter.GZIPFilter.doFilterInternal(GZIPFilter.java:65)
  947. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  948. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  949. at org.openmrs.module.webservices.rest.web.filter.AuthorizationFilter.doFilter(AuthorizationFilter.java:105)
  950. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  951. at org.openmrs.module.webservices.rest.web.filter.ContentTypeFilter.doFilter(ContentTypeFilter.java:64)
  952. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  953. at org.springframework.web.filter.ShallowEtagHeaderFilter.doFilterInternal(ShallowEtagHeaderFilter.java:82)
  954. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  955. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  956. at org.openmrs.module.owa.filter.OwaFilter.doFilter(OwaFilter.java:57)
  957. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  958. at org.openmrs.module.referenceapplication.filter.RequireLoginLocationFilter.doFilter(RequireLoginLocationFilter.java:93)
  959. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  960. at org.openmrs.module.web.filter.ModuleFilter.doFilter(ModuleFilter.java:57)
  961. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  962. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  963. at org.openmrs.web.filter.OpenmrsFilter.doFilterInternal(OpenmrsFilter.java:109)
  964. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  965. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  966. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  967. at org.springframework.orm.hibernate4.support.OpenSessionInViewFilter.doFilterInternal(OpenSessionInViewFilter.java:150)
  968. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  969. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  970. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  971. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  972. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  973. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  974. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  975. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  976. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  977. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  978. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  979. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  980. at org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:88)
  981. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  982. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  983. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  984. at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:219)
  985. at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:110)
  986. at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:494)
  987. at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:169)
  988. at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:104)
  989. at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:1025)
  990. at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:116)
  991. at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:445)
  992. at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1137)
  993. at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:637)
  994. at org.apache.tomcat.util.net.AprEndpoint$SocketWithOptionsProcessor.run(AprEndpoint.java:2512)
  995. at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
  996. at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
  997. at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
  998. at java.lang.Thread.run(Thread.java:748)
  999. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:36,033| No concept found for 'CIEL:1115'
  1000. ERROR - CsvParser.process(211) |2020-04-15 23:23:36,045| An OpenMRS object could not be constructed or saved from the following CSV line:
  1001. [43173d1f-518b-4f11-b440-7742b239876e, Extremity exam findings - COVID, null, null, Finding, Coded, CIEL:1115;CIEL:1116, null, null, null]
  1002. java.lang.IllegalArgumentException: The object identified by 'CIEL:1115' could not be found in database. The parent or encompassing object referencing the following list was therefore not created/updated: [CIEL:1115;CIEL:1116].
  1003. at org.openmrs.module.initializer.api.utils.ListParser.parseList(ListParser.java:63)
  1004. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:38)
  1005. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:14)
  1006. at org.openmrs.module.initializer.api.CsvParser.createInstance(CsvParser.java:253)
  1007. at org.openmrs.module.initializer.api.CsvParser.process(CsvParser.java:201)
  1008. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.loadCsvFiles(BaseCsvLoader.java:77)
  1009. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.load(BaseCsvLoader.java:33)
  1010. at org.openmrs.module.initializer.InitializerActivator.started(InitializerActivator.java:33)
  1011. at org.openmrs.module.ModuleUtil.refreshApplicationContext(ModuleUtil.java:931)
  1012. at org.openmrs.module.web.WebModuleUtil.refreshWAC(WebModuleUtil.java:847)
  1013. at org.openmrs.module.web.WebModuleUtil.startModule(WebModuleUtil.java:312)
  1014. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:94)
  1015. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:89)
  1016. at org.openmrs.module.webservices.rest.web.v1_0.resource.openmrs1_8.ModuleResource1_8.upload(ModuleResource1_8.java:187)
  1017. at org.openmrs.module.webservices.rest.web.v1_0.controller.MainResourceController.upload(MainResourceController.java:104)
  1018. at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
  1019. at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
  1020. at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
  1021. at java.lang.reflect.Method.invoke(Method.java:498)
  1022. at org.springframework.web.bind.annotation.support.HandlerMethodInvoker.invokeHandlerMethod(HandlerMethodInvoker.java:177)
  1023. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.invokeHandlerMethod(AnnotationMethodHandlerAdapter.java:446)
  1024. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.handle(AnnotationMethodHandlerAdapter.java:434)
  1025. at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:943)
  1026. at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:877)
  1027. at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:966)
  1028. at org.springframework.web.servlet.FrameworkServlet.doPost(FrameworkServlet.java:868)
  1029. at javax.servlet.http.HttpServlet.service(HttpServlet.java:650)
  1030. at org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:842)
  1031. at javax.servlet.http.HttpServlet.service(HttpServlet.java:731)
  1032. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:303)
  1033. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1034. at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52)
  1035. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1036. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1037. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:73)
  1038. at org.openmrs.web.filter.GZIPFilter.doFilterInternal(GZIPFilter.java:65)
  1039. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1040. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1041. at org.openmrs.module.webservices.rest.web.filter.AuthorizationFilter.doFilter(AuthorizationFilter.java:105)
  1042. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1043. at org.openmrs.module.webservices.rest.web.filter.ContentTypeFilter.doFilter(ContentTypeFilter.java:64)
  1044. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1045. at org.springframework.web.filter.ShallowEtagHeaderFilter.doFilterInternal(ShallowEtagHeaderFilter.java:82)
  1046. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1047. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1048. at org.openmrs.module.owa.filter.OwaFilter.doFilter(OwaFilter.java:57)
  1049. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1050. at org.openmrs.module.referenceapplication.filter.RequireLoginLocationFilter.doFilter(RequireLoginLocationFilter.java:93)
  1051. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1052. at org.openmrs.module.web.filter.ModuleFilter.doFilter(ModuleFilter.java:57)
  1053. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1054. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1055. at org.openmrs.web.filter.OpenmrsFilter.doFilterInternal(OpenmrsFilter.java:109)
  1056. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1057. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1058. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1059. at org.springframework.orm.hibernate4.support.OpenSessionInViewFilter.doFilterInternal(OpenSessionInViewFilter.java:150)
  1060. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1061. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1062. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1063. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  1064. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1065. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1066. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  1067. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1068. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1069. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  1070. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1071. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1072. at org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:88)
  1073. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1074. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1075. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1076. at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:219)
  1077. at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:110)
  1078. at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:494)
  1079. at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:169)
  1080. at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:104)
  1081. at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:1025)
  1082. at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:116)
  1083. at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:445)
  1084. at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1137)
  1085. at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:637)
  1086. at org.apache.tomcat.util.net.AprEndpoint$SocketWithOptionsProcessor.run(AprEndpoint.java:2512)
  1087. at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
  1088. at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
  1089. at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
  1090. at java.lang.Thread.run(Thread.java:748)
  1091. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:36,085| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1092. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:36,150| Exiting method saveConcept
  1093. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:36,197| No concept found for 'CIEL:1115'
  1094. ERROR - CsvParser.process(211) |2020-04-15 23:23:36,216| An OpenMRS object could not be constructed or saved from the following CSV line:
  1095. [66cccc06-f673-43a7-9e33-b4f2f6031944, Neurologic exam findings - COVID, null, null, Finding, Coded, CIEL:1115;CIEL:1116, null, null, null]
  1096. java.lang.IllegalArgumentException: The object identified by 'CIEL:1115' could not be found in database. The parent or encompassing object referencing the following list was therefore not created/updated: [CIEL:1115;CIEL:1116].
  1097. at org.openmrs.module.initializer.api.utils.ListParser.parseList(ListParser.java:63)
  1098. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:38)
  1099. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:14)
  1100. at org.openmrs.module.initializer.api.CsvParser.createInstance(CsvParser.java:253)
  1101. at org.openmrs.module.initializer.api.CsvParser.process(CsvParser.java:201)
  1102. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.loadCsvFiles(BaseCsvLoader.java:77)
  1103. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.load(BaseCsvLoader.java:33)
  1104. at org.openmrs.module.initializer.InitializerActivator.started(InitializerActivator.java:33)
  1105. at org.openmrs.module.ModuleUtil.refreshApplicationContext(ModuleUtil.java:931)
  1106. at org.openmrs.module.web.WebModuleUtil.refreshWAC(WebModuleUtil.java:847)
  1107. at org.openmrs.module.web.WebModuleUtil.startModule(WebModuleUtil.java:312)
  1108. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:94)
  1109. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:89)
  1110. at org.openmrs.module.webservices.rest.web.v1_0.resource.openmrs1_8.ModuleResource1_8.upload(ModuleResource1_8.java:187)
  1111. at org.openmrs.module.webservices.rest.web.v1_0.controller.MainResourceController.upload(MainResourceController.java:104)
  1112. at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
  1113. at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
  1114. at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
  1115. at java.lang.reflect.Method.invoke(Method.java:498)
  1116. at org.springframework.web.bind.annotation.support.HandlerMethodInvoker.invokeHandlerMethod(HandlerMethodInvoker.java:177)
  1117. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.invokeHandlerMethod(AnnotationMethodHandlerAdapter.java:446)
  1118. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.handle(AnnotationMethodHandlerAdapter.java:434)
  1119. at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:943)
  1120. at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:877)
  1121. at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:966)
  1122. at org.springframework.web.servlet.FrameworkServlet.doPost(FrameworkServlet.java:868)
  1123. at javax.servlet.http.HttpServlet.service(HttpServlet.java:650)
  1124. at org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:842)
  1125. at javax.servlet.http.HttpServlet.service(HttpServlet.java:731)
  1126. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:303)
  1127. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1128. at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52)
  1129. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1130. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1131. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:73)
  1132. at org.openmrs.web.filter.GZIPFilter.doFilterInternal(GZIPFilter.java:65)
  1133. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1134. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1135. at org.openmrs.module.webservices.rest.web.filter.AuthorizationFilter.doFilter(AuthorizationFilter.java:105)
  1136. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1137. at org.openmrs.module.webservices.rest.web.filter.ContentTypeFilter.doFilter(ContentTypeFilter.java:64)
  1138. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1139. at org.springframework.web.filter.ShallowEtagHeaderFilter.doFilterInternal(ShallowEtagHeaderFilter.java:82)
  1140. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1141. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1142. at org.openmrs.module.owa.filter.OwaFilter.doFilter(OwaFilter.java:57)
  1143. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1144. at org.openmrs.module.referenceapplication.filter.RequireLoginLocationFilter.doFilter(RequireLoginLocationFilter.java:93)
  1145. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1146. at org.openmrs.module.web.filter.ModuleFilter.doFilter(ModuleFilter.java:57)
  1147. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1148. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1149. at org.openmrs.web.filter.OpenmrsFilter.doFilterInternal(OpenmrsFilter.java:109)
  1150. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1151. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1152. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1153. at org.springframework.orm.hibernate4.support.OpenSessionInViewFilter.doFilterInternal(OpenSessionInViewFilter.java:150)
  1154. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1155. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1156. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1157. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  1158. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1159. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1160. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  1161. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1162. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1163. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  1164. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1165. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1166. at org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:88)
  1167. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1168. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1169. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1170. at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:219)
  1171. at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:110)
  1172. at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:494)
  1173. at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:169)
  1174. at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:104)
  1175. at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:1025)
  1176. at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:116)
  1177. at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:445)
  1178. at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1137)
  1179. at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:637)
  1180. at org.apache.tomcat.util.net.AprEndpoint$SocketWithOptionsProcessor.run(AprEndpoint.java:2512)
  1181. at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
  1182. at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
  1183. at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
  1184. at java.lang.Thread.run(Thread.java:748)
  1185. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:36,249| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1186. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:36,302| Exiting method saveConcept
  1187. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:36,339| No concept found for 'CIEL:70116'
  1188. ERROR - CsvParser.process(211) |2020-04-15 23:23:36,359| An OpenMRS object could not be constructed or saved from the following CSV line:
  1189. [74570938-5ea1-4e96-bf81-63a986ad2341, MEDICATIONS TAKEN - COVID, null, null, Finding, Coded, CIEL:70116;CIEL:77897;CIEL:81073, null, null, null]
  1190. java.lang.IllegalArgumentException: The object identified by 'CIEL:70116' could not be found in database. The parent or encompassing object referencing the following list was therefore not created/updated: [CIEL:70116;CIEL:77897;CIEL:81073].
  1191. at org.openmrs.module.initializer.api.utils.ListParser.parseList(ListParser.java:63)
  1192. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:38)
  1193. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:14)
  1194. at org.openmrs.module.initializer.api.CsvParser.createInstance(CsvParser.java:253)
  1195. at org.openmrs.module.initializer.api.CsvParser.process(CsvParser.java:201)
  1196. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.loadCsvFiles(BaseCsvLoader.java:77)
  1197. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.load(BaseCsvLoader.java:33)
  1198. at org.openmrs.module.initializer.InitializerActivator.started(InitializerActivator.java:33)
  1199. at org.openmrs.module.ModuleUtil.refreshApplicationContext(ModuleUtil.java:931)
  1200. at org.openmrs.module.web.WebModuleUtil.refreshWAC(WebModuleUtil.java:847)
  1201. at org.openmrs.module.web.WebModuleUtil.startModule(WebModuleUtil.java:312)
  1202. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:94)
  1203. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:89)
  1204. at org.openmrs.module.webservices.rest.web.v1_0.resource.openmrs1_8.ModuleResource1_8.upload(ModuleResource1_8.java:187)
  1205. at org.openmrs.module.webservices.rest.web.v1_0.controller.MainResourceController.upload(MainResourceController.java:104)
  1206. at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
  1207. at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
  1208. at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
  1209. at java.lang.reflect.Method.invoke(Method.java:498)
  1210. at org.springframework.web.bind.annotation.support.HandlerMethodInvoker.invokeHandlerMethod(HandlerMethodInvoker.java:177)
  1211. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.invokeHandlerMethod(AnnotationMethodHandlerAdapter.java:446)
  1212. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.handle(AnnotationMethodHandlerAdapter.java:434)
  1213. at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:943)
  1214. at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:877)
  1215. at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:966)
  1216. at org.springframework.web.servlet.FrameworkServlet.doPost(FrameworkServlet.java:868)
  1217. at javax.servlet.http.HttpServlet.service(HttpServlet.java:650)
  1218. at org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:842)
  1219. at javax.servlet.http.HttpServlet.service(HttpServlet.java:731)
  1220. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:303)
  1221. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1222. at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52)
  1223. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1224. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1225. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:73)
  1226. at org.openmrs.web.filter.GZIPFilter.doFilterInternal(GZIPFilter.java:65)
  1227. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1228. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1229. at org.openmrs.module.webservices.rest.web.filter.AuthorizationFilter.doFilter(AuthorizationFilter.java:105)
  1230. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1231. at org.openmrs.module.webservices.rest.web.filter.ContentTypeFilter.doFilter(ContentTypeFilter.java:64)
  1232. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1233. at org.springframework.web.filter.ShallowEtagHeaderFilter.doFilterInternal(ShallowEtagHeaderFilter.java:82)
  1234. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1235. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1236. at org.openmrs.module.owa.filter.OwaFilter.doFilter(OwaFilter.java:57)
  1237. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1238. at org.openmrs.module.referenceapplication.filter.RequireLoginLocationFilter.doFilter(RequireLoginLocationFilter.java:93)
  1239. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1240. at org.openmrs.module.web.filter.ModuleFilter.doFilter(ModuleFilter.java:57)
  1241. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1242. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1243. at org.openmrs.web.filter.OpenmrsFilter.doFilterInternal(OpenmrsFilter.java:109)
  1244. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1245. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1246. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1247. at org.springframework.orm.hibernate4.support.OpenSessionInViewFilter.doFilterInternal(OpenSessionInViewFilter.java:150)
  1248. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1249. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1250. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1251. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  1252. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1253. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1254. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  1255. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1256. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1257. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  1258. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1259. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1260. at org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:88)
  1261. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1262. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1263. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1264. at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:219)
  1265. at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:110)
  1266. at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:494)
  1267. at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:169)
  1268. at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:104)
  1269. at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:1025)
  1270. at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:116)
  1271. at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:445)
  1272. at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1137)
  1273. at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:637)
  1274. at org.apache.tomcat.util.net.AprEndpoint$SocketWithOptionsProcessor.run(AprEndpoint.java:2512)
  1275. at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
  1276. at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
  1277. at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
  1278. at java.lang.Thread.run(Thread.java:748)
  1279. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:36,404| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1280. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:36,466| Exiting method saveConcept
  1281. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:36,515| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1282. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:36,570| Exiting method saveConcept
  1283. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:36,612| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1284. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:36,663| Exiting method saveConcept
  1285. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:36,707| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1286. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:36,759| Exiting method saveConcept
  1287. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:36,801| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1288. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:36,887| Exiting method saveConcept
  1289. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:36,928| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1290. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:36,998| Exiting method saveConcept
  1291. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:37,056| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1292. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:37,138| Exiting method saveConcept
  1293. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:37,167| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1294. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:37,228| Exiting method saveConcept
  1295. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:37,254| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1296. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:37,327| Exiting method saveConcept
  1297. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:37,366| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1298. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:37,422| Exiting method saveConcept
  1299. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:37,457| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1300. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:37,496| Exiting method saveConcept
  1301. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:37,540| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1302. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:37,597| Exiting method saveConcept
  1303. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:37,636| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1304. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:37,703| Exiting method saveConcept
  1305. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:37,728| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1306. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:37,814| Exiting method saveConcept
  1307. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:37,849| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1308. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:37,908| Exiting method saveConcept
  1309. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:37,964| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1310. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:38,050| Exiting method saveConcept
  1311. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:38,099| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1312. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:38,153| Exiting method saveConcept
  1313. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:38,200| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1314. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:38,254| Exiting method saveConcept
  1315. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:38,296| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1316. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:38,361| Exiting method saveConcept
  1317. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:38,411| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1318. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:38,479| Exiting method saveConcept
  1319. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:38,514| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1320. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:38,570| Exiting method saveConcept
  1321. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:38,606| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1322. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:38,667| Exiting method saveConcept
  1323. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:38,733| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1324. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:38,816| Exiting method saveConcept
  1325. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:38,878| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1326. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:38,958| Exiting method saveConcept
  1327. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:38,992| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1328. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:39,042| Exiting method saveConcept
  1329. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:39,083| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1330. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:39,136| Exiting method saveConcept
  1331. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:39,181| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1332. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:39,237| Exiting method saveConcept
  1333. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:39,279| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1334. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:39,333| Exiting method saveConcept
  1335. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:39,373| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1336. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:39,431| Exiting method saveConcept
  1337. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:39,480| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1338. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:39,537| Exiting method saveConcept
  1339. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:39,580| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1340. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:39,651| Exiting method saveConcept
  1341. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:39,685| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1342. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:39,772| Exiting method saveConcept
  1343. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:39,807| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1344. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:39,899| Exiting method saveConcept
  1345. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:39,931| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1346. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:39,990| Exiting method saveConcept
  1347. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:40,024| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1348. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:40,069| Exiting method saveConcept
  1349. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:40,109| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1350. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:40,167| Exiting method saveConcept
  1351. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:40,195| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1352. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:40,241| Exiting method saveConcept
  1353. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:40,274| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1354. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:40,325| Exiting method saveConcept
  1355. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:40,612| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1356. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:40,752| Exiting method saveConcept
  1357. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:40,777| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
  1358. INFO - LoggingAdvice.invoke(156) |2020-04-15 23:23:40,838| Exiting method saveConcept
  1359. INFO - BaseCsvLoader.loadCsvFiles(75) |2020-04-15 23:23:40,839| Attempting to process 10 CSV lines that have not been processed yet...
  1360. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:40,882| No concept found for 'CIEL:163468'
  1361. ERROR - CsvParser.process(211) |2020-04-15 23:23:40,900| An OpenMRS object could not be constructed or saved from the following CSV line:
  1362. [57b762ca-0ea8-4e86-9449-18c58a651cf3, SARS-CoV-2 Occupational Exposure, null, Any exposures to SARS-CoV-2 related to the patient's occupation, Question, Coded, CIEL:163468;CIEL:5619;987a7256-ed27-4747-b9cc-c46472dd2a3c, null, null, null]
  1363. java.lang.IllegalArgumentException: The object identified by 'CIEL:163468' could not be found in database. The parent or encompassing object referencing the following list was therefore not created/updated: [CIEL:163468;CIEL:5619;987a7256-ed27-4747-b9cc-c46472dd2a3c].
  1364. at org.openmrs.module.initializer.api.utils.ListParser.parseList(ListParser.java:63)
  1365. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:38)
  1366. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:14)
  1367. at org.openmrs.module.initializer.api.CsvParser.createInstance(CsvParser.java:253)
  1368. at org.openmrs.module.initializer.api.CsvParser.process(CsvParser.java:201)
  1369. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.loadCsvFiles(BaseCsvLoader.java:77)
  1370. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.load(BaseCsvLoader.java:33)
  1371. at org.openmrs.module.initializer.InitializerActivator.started(InitializerActivator.java:33)
  1372. at org.openmrs.module.ModuleUtil.refreshApplicationContext(ModuleUtil.java:931)
  1373. at org.openmrs.module.web.WebModuleUtil.refreshWAC(WebModuleUtil.java:847)
  1374. at org.openmrs.module.web.WebModuleUtil.startModule(WebModuleUtil.java:312)
  1375. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:94)
  1376. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:89)
  1377. at org.openmrs.module.webservices.rest.web.v1_0.resource.openmrs1_8.ModuleResource1_8.upload(ModuleResource1_8.java:187)
  1378. at org.openmrs.module.webservices.rest.web.v1_0.controller.MainResourceController.upload(MainResourceController.java:104)
  1379. at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
  1380. at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
  1381. at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
  1382. at java.lang.reflect.Method.invoke(Method.java:498)
  1383. at org.springframework.web.bind.annotation.support.HandlerMethodInvoker.invokeHandlerMethod(HandlerMethodInvoker.java:177)
  1384. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.invokeHandlerMethod(AnnotationMethodHandlerAdapter.java:446)
  1385. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.handle(AnnotationMethodHandlerAdapter.java:434)
  1386. at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:943)
  1387. at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:877)
  1388. at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:966)
  1389. at org.springframework.web.servlet.FrameworkServlet.doPost(FrameworkServlet.java:868)
  1390. at javax.servlet.http.HttpServlet.service(HttpServlet.java:650)
  1391. at org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:842)
  1392. at javax.servlet.http.HttpServlet.service(HttpServlet.java:731)
  1393. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:303)
  1394. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1395. at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52)
  1396. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1397. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1398. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:73)
  1399. at org.openmrs.web.filter.GZIPFilter.doFilterInternal(GZIPFilter.java:65)
  1400. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1401. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1402. at org.openmrs.module.webservices.rest.web.filter.AuthorizationFilter.doFilter(AuthorizationFilter.java:105)
  1403. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1404. at org.openmrs.module.webservices.rest.web.filter.ContentTypeFilter.doFilter(ContentTypeFilter.java:64)
  1405. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1406. at org.springframework.web.filter.ShallowEtagHeaderFilter.doFilterInternal(ShallowEtagHeaderFilter.java:82)
  1407. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1408. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1409. at org.openmrs.module.owa.filter.OwaFilter.doFilter(OwaFilter.java:57)
  1410. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1411. at org.openmrs.module.referenceapplication.filter.RequireLoginLocationFilter.doFilter(RequireLoginLocationFilter.java:93)
  1412. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1413. at org.openmrs.module.web.filter.ModuleFilter.doFilter(ModuleFilter.java:57)
  1414. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1415. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1416. at org.openmrs.web.filter.OpenmrsFilter.doFilterInternal(OpenmrsFilter.java:109)
  1417. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1418. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1419. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1420. at org.springframework.orm.hibernate4.support.OpenSessionInViewFilter.doFilterInternal(OpenSessionInViewFilter.java:150)
  1421. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1422. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1423. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1424. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  1425. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1426. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1427. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  1428. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1429. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1430. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  1431. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1432. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1433. at org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:88)
  1434. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1435. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1436. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1437. at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:219)
  1438. at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:110)
  1439. at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:494)
  1440. at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:169)
  1441. at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:104)
  1442. at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:1025)
  1443. at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:116)
  1444. at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:445)
  1445. at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1137)
  1446. at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:637)
  1447. at org.apache.tomcat.util.net.AprEndpoint$SocketWithOptionsProcessor.run(AprEndpoint.java:2512)
  1448. at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
  1449. at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
  1450. at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
  1451. at java.lang.Thread.run(Thread.java:748)
  1452. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:40,938| No concept found for 'CIEL:117277'
  1453. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:40,976| No concept found for 'CIEL:119481'
  1454. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:41,006| No concept found for 'CIEL:6032'
  1455. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:41,035| No concept found for 'CIEL:6033'
  1456. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:41,074| No concept found for 'CIEL:165646'
  1457. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:41,118| No concept found for 'CIEL:116031'
  1458. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:41,153| No concept found for 'CIEL:121375'
  1459. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:41,184| No concept found for 'CIEL:155569'
  1460. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:41,211| No concept found for 'CIEL:119270'
  1461. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:41,247| No concept found for 'CIEL:5016'
  1462. ERROR - CsvParser.process(211) |2020-04-15 23:23:41,264| An OpenMRS object could not be constructed or saved from the following CSV line:
  1463. [f3f0fdd4-632d-4998-9637-1a32c02a4512, PROBLEM LIST - COVID, null, null, Diagnosis, Coded, CIEL:117277;CIEL:119481;CIEL:6032;CIEL:6033;CIEL:165646;CIEL:116031;CIEL:121375;CIEL:155569;CIEL:119270;CIEL:5016;CIEL:117399;CIEL:155;CIEL:134337;CIEL:145439;CIEL:5622;CIEL:1295;CIEL:111103;CIEL:119910, null, null, null]
  1464. java.lang.IllegalArgumentException: The object identified by 'CIEL:5016' could not be found in database. The parent or encompassing object referencing the following list was therefore not created/updated: [CIEL:117277;CIEL:119481;CIEL:6032;CIEL:6033;CIEL:165646;CIEL:116031;CIEL:121375;CIEL:155569;CIEL:119270;CIEL:5016;CIEL:117399;CIEL:155;CIEL:134337;CIEL:145439;CIEL:5622;CIEL:1295;CIEL:111103;CIEL:119910].
  1465. at org.openmrs.module.initializer.api.utils.ListParser.parseList(ListParser.java:63)
  1466. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:38)
  1467. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:14)
  1468. at org.openmrs.module.initializer.api.CsvParser.createInstance(CsvParser.java:253)
  1469. at org.openmrs.module.initializer.api.CsvParser.process(CsvParser.java:201)
  1470. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.loadCsvFiles(BaseCsvLoader.java:77)
  1471. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.load(BaseCsvLoader.java:33)
  1472. at org.openmrs.module.initializer.InitializerActivator.started(InitializerActivator.java:33)
  1473. at org.openmrs.module.ModuleUtil.refreshApplicationContext(ModuleUtil.java:931)
  1474. at org.openmrs.module.web.WebModuleUtil.refreshWAC(WebModuleUtil.java:847)
  1475. at org.openmrs.module.web.WebModuleUtil.startModule(WebModuleUtil.java:312)
  1476. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:94)
  1477. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:89)
  1478. at org.openmrs.module.webservices.rest.web.v1_0.resource.openmrs1_8.ModuleResource1_8.upload(ModuleResource1_8.java:187)
  1479. at org.openmrs.module.webservices.rest.web.v1_0.controller.MainResourceController.upload(MainResourceController.java:104)
  1480. at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
  1481. at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
  1482. at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
  1483. at java.lang.reflect.Method.invoke(Method.java:498)
  1484. at org.springframework.web.bind.annotation.support.HandlerMethodInvoker.invokeHandlerMethod(HandlerMethodInvoker.java:177)
  1485. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.invokeHandlerMethod(AnnotationMethodHandlerAdapter.java:446)
  1486. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.handle(AnnotationMethodHandlerAdapter.java:434)
  1487. at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:943)
  1488. at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:877)
  1489. at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:966)
  1490. at org.springframework.web.servlet.FrameworkServlet.doPost(FrameworkServlet.java:868)
  1491. at javax.servlet.http.HttpServlet.service(HttpServlet.java:650)
  1492. at org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:842)
  1493. at javax.servlet.http.HttpServlet.service(HttpServlet.java:731)
  1494. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:303)
  1495. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1496. at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52)
  1497. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1498. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1499. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:73)
  1500. at org.openmrs.web.filter.GZIPFilter.doFilterInternal(GZIPFilter.java:65)
  1501. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1502. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1503. at org.openmrs.module.webservices.rest.web.filter.AuthorizationFilter.doFilter(AuthorizationFilter.java:105)
  1504. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1505. at org.openmrs.module.webservices.rest.web.filter.ContentTypeFilter.doFilter(ContentTypeFilter.java:64)
  1506. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1507. at org.springframework.web.filter.ShallowEtagHeaderFilter.doFilterInternal(ShallowEtagHeaderFilter.java:82)
  1508. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1509. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1510. at org.openmrs.module.owa.filter.OwaFilter.doFilter(OwaFilter.java:57)
  1511. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1512. at org.openmrs.module.referenceapplication.filter.RequireLoginLocationFilter.doFilter(RequireLoginLocationFilter.java:93)
  1513. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1514. at org.openmrs.module.web.filter.ModuleFilter.doFilter(ModuleFilter.java:57)
  1515. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1516. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1517. at org.openmrs.web.filter.OpenmrsFilter.doFilterInternal(OpenmrsFilter.java:109)
  1518. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1519. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1520. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1521. at org.springframework.orm.hibernate4.support.OpenSessionInViewFilter.doFilterInternal(OpenSessionInViewFilter.java:150)
  1522. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1523. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1524. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1525. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  1526. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1527. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1528. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  1529. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1530. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1531. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  1532. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1533. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1534. at org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:88)
  1535. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1536. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1537. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1538. at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:219)
  1539. at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:110)
  1540. at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:494)
  1541. at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:169)
  1542. at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:104)
  1543. at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:1025)
  1544. at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:116)
  1545. at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:445)
  1546. at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1137)
  1547. at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:637)
  1548. at org.apache.tomcat.util.net.AprEndpoint$SocketWithOptionsProcessor.run(AprEndpoint.java:2512)
  1549. at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
  1550. at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
  1551. at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
  1552. at java.lang.Thread.run(Thread.java:748)
  1553. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:41,320| No concept found for 'CIEL:1115'
  1554. ERROR - CsvParser.process(211) |2020-04-15 23:23:41,338| An OpenMRS object could not be constructed or saved from the following CSV line:
  1555. [29ed77d2-acd8-4095-b54c-38397b77adb4, GENERAL EXAM FINDINGS - COVID, null, null, Finding, Coded, CIEL:1115;CIEL:1116, null, null, null]
  1556. java.lang.IllegalArgumentException: The object identified by 'CIEL:1115' could not be found in database. The parent or encompassing object referencing the following list was therefore not created/updated: [CIEL:1115;CIEL:1116].
  1557. at org.openmrs.module.initializer.api.utils.ListParser.parseList(ListParser.java:63)
  1558. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:38)
  1559. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:14)
  1560. at org.openmrs.module.initializer.api.CsvParser.createInstance(CsvParser.java:253)
  1561. at org.openmrs.module.initializer.api.CsvParser.process(CsvParser.java:201)
  1562. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.loadCsvFiles(BaseCsvLoader.java:77)
  1563. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.load(BaseCsvLoader.java:33)
  1564. at org.openmrs.module.initializer.InitializerActivator.started(InitializerActivator.java:33)
  1565. at org.openmrs.module.ModuleUtil.refreshApplicationContext(ModuleUtil.java:931)
  1566. at org.openmrs.module.web.WebModuleUtil.refreshWAC(WebModuleUtil.java:847)
  1567. at org.openmrs.module.web.WebModuleUtil.startModule(WebModuleUtil.java:312)
  1568. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:94)
  1569. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:89)
  1570. at org.openmrs.module.webservices.rest.web.v1_0.resource.openmrs1_8.ModuleResource1_8.upload(ModuleResource1_8.java:187)
  1571. at org.openmrs.module.webservices.rest.web.v1_0.controller.MainResourceController.upload(MainResourceController.java:104)
  1572. at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
  1573. at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
  1574. at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
  1575. at java.lang.reflect.Method.invoke(Method.java:498)
  1576. at org.springframework.web.bind.annotation.support.HandlerMethodInvoker.invokeHandlerMethod(HandlerMethodInvoker.java:177)
  1577. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.invokeHandlerMethod(AnnotationMethodHandlerAdapter.java:446)
  1578. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.handle(AnnotationMethodHandlerAdapter.java:434)
  1579. at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:943)
  1580. at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:877)
  1581. at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:966)
  1582. at org.springframework.web.servlet.FrameworkServlet.doPost(FrameworkServlet.java:868)
  1583. at javax.servlet.http.HttpServlet.service(HttpServlet.java:650)
  1584. at org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:842)
  1585. at javax.servlet.http.HttpServlet.service(HttpServlet.java:731)
  1586. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:303)
  1587. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1588. at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52)
  1589. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1590. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1591. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:73)
  1592. at org.openmrs.web.filter.GZIPFilter.doFilterInternal(GZIPFilter.java:65)
  1593. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1594. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1595. at org.openmrs.module.webservices.rest.web.filter.AuthorizationFilter.doFilter(AuthorizationFilter.java:105)
  1596. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1597. at org.openmrs.module.webservices.rest.web.filter.ContentTypeFilter.doFilter(ContentTypeFilter.java:64)
  1598. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1599. at org.springframework.web.filter.ShallowEtagHeaderFilter.doFilterInternal(ShallowEtagHeaderFilter.java:82)
  1600. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1601. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1602. at org.openmrs.module.owa.filter.OwaFilter.doFilter(OwaFilter.java:57)
  1603. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1604. at org.openmrs.module.referenceapplication.filter.RequireLoginLocationFilter.doFilter(RequireLoginLocationFilter.java:93)
  1605. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1606. at org.openmrs.module.web.filter.ModuleFilter.doFilter(ModuleFilter.java:57)
  1607. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1608. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1609. at org.openmrs.web.filter.OpenmrsFilter.doFilterInternal(OpenmrsFilter.java:109)
  1610. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1611. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1612. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1613. at org.springframework.orm.hibernate4.support.OpenSessionInViewFilter.doFilterInternal(OpenSessionInViewFilter.java:150)
  1614. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1615. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1616. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1617. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  1618. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1619. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1620. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  1621. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1622. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1623. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  1624. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1625. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1626. at org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:88)
  1627. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1628. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1629. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1630. at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:219)
  1631. at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:110)
  1632. at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:494)
  1633. at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:169)
  1634. at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:104)
  1635. at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:1025)
  1636. at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:116)
  1637. at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:445)
  1638. at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1137)
  1639. at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:637)
  1640. at org.apache.tomcat.util.net.AprEndpoint$SocketWithOptionsProcessor.run(AprEndpoint.java:2512)
  1641. at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
  1642. at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
  1643. at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
  1644. at java.lang.Thread.run(Thread.java:748)
  1645. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:41,380| No concept found for 'CIEL:1115'
  1646. ERROR - CsvParser.process(211) |2020-04-15 23:23:41,398| An OpenMRS object could not be constructed or saved from the following CSV line:
  1647. [c9672fb7-83b8-4543-a8c9-3e5ad8b4a58c, HEENT exam findings - COVID, null, null, Finding, Coded, CIEL:1115;CIEL:1116, null, null, null]
  1648. java.lang.IllegalArgumentException: The object identified by 'CIEL:1115' could not be found in database. The parent or encompassing object referencing the following list was therefore not created/updated: [CIEL:1115;CIEL:1116].
  1649. at org.openmrs.module.initializer.api.utils.ListParser.parseList(ListParser.java:63)
  1650. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:38)
  1651. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:14)
  1652. at org.openmrs.module.initializer.api.CsvParser.createInstance(CsvParser.java:253)
  1653. at org.openmrs.module.initializer.api.CsvParser.process(CsvParser.java:201)
  1654. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.loadCsvFiles(BaseCsvLoader.java:77)
  1655. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.load(BaseCsvLoader.java:33)
  1656. at org.openmrs.module.initializer.InitializerActivator.started(InitializerActivator.java:33)
  1657. at org.openmrs.module.ModuleUtil.refreshApplicationContext(ModuleUtil.java:931)
  1658. at org.openmrs.module.web.WebModuleUtil.refreshWAC(WebModuleUtil.java:847)
  1659. at org.openmrs.module.web.WebModuleUtil.startModule(WebModuleUtil.java:312)
  1660. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:94)
  1661. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:89)
  1662. at org.openmrs.module.webservices.rest.web.v1_0.resource.openmrs1_8.ModuleResource1_8.upload(ModuleResource1_8.java:187)
  1663. at org.openmrs.module.webservices.rest.web.v1_0.controller.MainResourceController.upload(MainResourceController.java:104)
  1664. at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
  1665. at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
  1666. at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
  1667. at java.lang.reflect.Method.invoke(Method.java:498)
  1668. at org.springframework.web.bind.annotation.support.HandlerMethodInvoker.invokeHandlerMethod(HandlerMethodInvoker.java:177)
  1669. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.invokeHandlerMethod(AnnotationMethodHandlerAdapter.java:446)
  1670. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.handle(AnnotationMethodHandlerAdapter.java:434)
  1671. at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:943)
  1672. at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:877)
  1673. at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:966)
  1674. at org.springframework.web.servlet.FrameworkServlet.doPost(FrameworkServlet.java:868)
  1675. at javax.servlet.http.HttpServlet.service(HttpServlet.java:650)
  1676. at org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:842)
  1677. at javax.servlet.http.HttpServlet.service(HttpServlet.java:731)
  1678. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:303)
  1679. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1680. at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52)
  1681. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1682. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1683. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:73)
  1684. at org.openmrs.web.filter.GZIPFilter.doFilterInternal(GZIPFilter.java:65)
  1685. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1686. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1687. at org.openmrs.module.webservices.rest.web.filter.AuthorizationFilter.doFilter(AuthorizationFilter.java:105)
  1688. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1689. at org.openmrs.module.webservices.rest.web.filter.ContentTypeFilter.doFilter(ContentTypeFilter.java:64)
  1690. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1691. at org.springframework.web.filter.ShallowEtagHeaderFilter.doFilterInternal(ShallowEtagHeaderFilter.java:82)
  1692. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1693. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1694. at org.openmrs.module.owa.filter.OwaFilter.doFilter(OwaFilter.java:57)
  1695. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1696. at org.openmrs.module.referenceapplication.filter.RequireLoginLocationFilter.doFilter(RequireLoginLocationFilter.java:93)
  1697. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1698. at org.openmrs.module.web.filter.ModuleFilter.doFilter(ModuleFilter.java:57)
  1699. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1700. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1701. at org.openmrs.web.filter.OpenmrsFilter.doFilterInternal(OpenmrsFilter.java:109)
  1702. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1703. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1704. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1705. at org.springframework.orm.hibernate4.support.OpenSessionInViewFilter.doFilterInternal(OpenSessionInViewFilter.java:150)
  1706. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1707. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1708. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1709. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  1710. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1711. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1712. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  1713. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1714. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1715. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  1716. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1717. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1718. at org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:88)
  1719. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1720. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1721. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1722. at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:219)
  1723. at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:110)
  1724. at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:494)
  1725. at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:169)
  1726. at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:104)
  1727. at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:1025)
  1728. at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:116)
  1729. at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:445)
  1730. at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1137)
  1731. at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:637)
  1732. at org.apache.tomcat.util.net.AprEndpoint$SocketWithOptionsProcessor.run(AprEndpoint.java:2512)
  1733. at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
  1734. at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
  1735. at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
  1736. at java.lang.Thread.run(Thread.java:748)
  1737. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:41,437| No concept found for 'CIEL:1115'
  1738. ERROR - CsvParser.process(211) |2020-04-15 23:23:41,449| An OpenMRS object could not be constructed or saved from the following CSV line:
  1739. [b68e2c76-c218-48b2-9164-246b3f6a0dc8, Pulmonary exam findings - COVID, null, null, Finding, Coded, CIEL:1115;CIEL:1116, null, null, null]
  1740. java.lang.IllegalArgumentException: The object identified by 'CIEL:1115' could not be found in database. The parent or encompassing object referencing the following list was therefore not created/updated: [CIEL:1115;CIEL:1116].
  1741. at org.openmrs.module.initializer.api.utils.ListParser.parseList(ListParser.java:63)
  1742. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:38)
  1743. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:14)
  1744. at org.openmrs.module.initializer.api.CsvParser.createInstance(CsvParser.java:253)
  1745. at org.openmrs.module.initializer.api.CsvParser.process(CsvParser.java:201)
  1746. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.loadCsvFiles(BaseCsvLoader.java:77)
  1747. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.load(BaseCsvLoader.java:33)
  1748. at org.openmrs.module.initializer.InitializerActivator.started(InitializerActivator.java:33)
  1749. at org.openmrs.module.ModuleUtil.refreshApplicationContext(ModuleUtil.java:931)
  1750. at org.openmrs.module.web.WebModuleUtil.refreshWAC(WebModuleUtil.java:847)
  1751. at org.openmrs.module.web.WebModuleUtil.startModule(WebModuleUtil.java:312)
  1752. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:94)
  1753. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:89)
  1754. at org.openmrs.module.webservices.rest.web.v1_0.resource.openmrs1_8.ModuleResource1_8.upload(ModuleResource1_8.java:187)
  1755. at org.openmrs.module.webservices.rest.web.v1_0.controller.MainResourceController.upload(MainResourceController.java:104)
  1756. at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
  1757. at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
  1758. at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
  1759. at java.lang.reflect.Method.invoke(Method.java:498)
  1760. at org.springframework.web.bind.annotation.support.HandlerMethodInvoker.invokeHandlerMethod(HandlerMethodInvoker.java:177)
  1761. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.invokeHandlerMethod(AnnotationMethodHandlerAdapter.java:446)
  1762. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.handle(AnnotationMethodHandlerAdapter.java:434)
  1763. at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:943)
  1764. at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:877)
  1765. at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:966)
  1766. at org.springframework.web.servlet.FrameworkServlet.doPost(FrameworkServlet.java:868)
  1767. at javax.servlet.http.HttpServlet.service(HttpServlet.java:650)
  1768. at org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:842)
  1769. at javax.servlet.http.HttpServlet.service(HttpServlet.java:731)
  1770. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:303)
  1771. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1772. at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52)
  1773. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1774. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1775. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:73)
  1776. at org.openmrs.web.filter.GZIPFilter.doFilterInternal(GZIPFilter.java:65)
  1777. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1778. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1779. at org.openmrs.module.webservices.rest.web.filter.AuthorizationFilter.doFilter(AuthorizationFilter.java:105)
  1780. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1781. at org.openmrs.module.webservices.rest.web.filter.ContentTypeFilter.doFilter(ContentTypeFilter.java:64)
  1782. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1783. at org.springframework.web.filter.ShallowEtagHeaderFilter.doFilterInternal(ShallowEtagHeaderFilter.java:82)
  1784. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1785. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1786. at org.openmrs.module.owa.filter.OwaFilter.doFilter(OwaFilter.java:57)
  1787. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1788. at org.openmrs.module.referenceapplication.filter.RequireLoginLocationFilter.doFilter(RequireLoginLocationFilter.java:93)
  1789. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1790. at org.openmrs.module.web.filter.ModuleFilter.doFilter(ModuleFilter.java:57)
  1791. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1792. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1793. at org.openmrs.web.filter.OpenmrsFilter.doFilterInternal(OpenmrsFilter.java:109)
  1794. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1795. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1796. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1797. at org.springframework.orm.hibernate4.support.OpenSessionInViewFilter.doFilterInternal(OpenSessionInViewFilter.java:150)
  1798. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1799. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1800. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1801. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  1802. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1803. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1804. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  1805. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1806. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1807. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  1808. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1809. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1810. at org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:88)
  1811. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1812. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1813. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1814. at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:219)
  1815. at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:110)
  1816. at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:494)
  1817. at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:169)
  1818. at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:104)
  1819. at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:1025)
  1820. at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:116)
  1821. at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:445)
  1822. at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1137)
  1823. at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:637)
  1824. at org.apache.tomcat.util.net.AprEndpoint$SocketWithOptionsProcessor.run(AprEndpoint.java:2512)
  1825. at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
  1826. at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
  1827. at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
  1828. at java.lang.Thread.run(Thread.java:748)
  1829. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:41,497| No concept found for 'CIEL:1115'
  1830. ERROR - CsvParser.process(211) |2020-04-15 23:23:41,508| An OpenMRS object could not be constructed or saved from the following CSV line:
  1831. [a356cc13-9009-407f-9fb7-b51c11918edf, Abdominal exam findings - COVID, null, null, Finding, Coded, CIEL:1115;CIEL:1116, null, null, null]
  1832. java.lang.IllegalArgumentException: The object identified by 'CIEL:1115' could not be found in database. The parent or encompassing object referencing the following list was therefore not created/updated: [CIEL:1115;CIEL:1116].
  1833. at org.openmrs.module.initializer.api.utils.ListParser.parseList(ListParser.java:63)
  1834. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:38)
  1835. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:14)
  1836. at org.openmrs.module.initializer.api.CsvParser.createInstance(CsvParser.java:253)
  1837. at org.openmrs.module.initializer.api.CsvParser.process(CsvParser.java:201)
  1838. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.loadCsvFiles(BaseCsvLoader.java:77)
  1839. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.load(BaseCsvLoader.java:33)
  1840. at org.openmrs.module.initializer.InitializerActivator.started(InitializerActivator.java:33)
  1841. at org.openmrs.module.ModuleUtil.refreshApplicationContext(ModuleUtil.java:931)
  1842. at org.openmrs.module.web.WebModuleUtil.refreshWAC(WebModuleUtil.java:847)
  1843. at org.openmrs.module.web.WebModuleUtil.startModule(WebModuleUtil.java:312)
  1844. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:94)
  1845. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:89)
  1846. at org.openmrs.module.webservices.rest.web.v1_0.resource.openmrs1_8.ModuleResource1_8.upload(ModuleResource1_8.java:187)
  1847. at org.openmrs.module.webservices.rest.web.v1_0.controller.MainResourceController.upload(MainResourceController.java:104)
  1848. at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
  1849. at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
  1850. at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
  1851. at java.lang.reflect.Method.invoke(Method.java:498)
  1852. at org.springframework.web.bind.annotation.support.HandlerMethodInvoker.invokeHandlerMethod(HandlerMethodInvoker.java:177)
  1853. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.invokeHandlerMethod(AnnotationMethodHandlerAdapter.java:446)
  1854. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.handle(AnnotationMethodHandlerAdapter.java:434)
  1855. at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:943)
  1856. at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:877)
  1857. at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:966)
  1858. at org.springframework.web.servlet.FrameworkServlet.doPost(FrameworkServlet.java:868)
  1859. at javax.servlet.http.HttpServlet.service(HttpServlet.java:650)
  1860. at org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:842)
  1861. at javax.servlet.http.HttpServlet.service(HttpServlet.java:731)
  1862. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:303)
  1863. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1864. at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52)
  1865. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1866. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1867. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:73)
  1868. at org.openmrs.web.filter.GZIPFilter.doFilterInternal(GZIPFilter.java:65)
  1869. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1870. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1871. at org.openmrs.module.webservices.rest.web.filter.AuthorizationFilter.doFilter(AuthorizationFilter.java:105)
  1872. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1873. at org.openmrs.module.webservices.rest.web.filter.ContentTypeFilter.doFilter(ContentTypeFilter.java:64)
  1874. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1875. at org.springframework.web.filter.ShallowEtagHeaderFilter.doFilterInternal(ShallowEtagHeaderFilter.java:82)
  1876. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1877. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1878. at org.openmrs.module.owa.filter.OwaFilter.doFilter(OwaFilter.java:57)
  1879. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1880. at org.openmrs.module.referenceapplication.filter.RequireLoginLocationFilter.doFilter(RequireLoginLocationFilter.java:93)
  1881. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1882. at org.openmrs.module.web.filter.ModuleFilter.doFilter(ModuleFilter.java:57)
  1883. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1884. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1885. at org.openmrs.web.filter.OpenmrsFilter.doFilterInternal(OpenmrsFilter.java:109)
  1886. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1887. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1888. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1889. at org.springframework.orm.hibernate4.support.OpenSessionInViewFilter.doFilterInternal(OpenSessionInViewFilter.java:150)
  1890. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1891. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1892. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1893. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  1894. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1895. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1896. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  1897. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1898. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1899. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  1900. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1901. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1902. at org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:88)
  1903. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1904. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1905. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1906. at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:219)
  1907. at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:110)
  1908. at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:494)
  1909. at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:169)
  1910. at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:104)
  1911. at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:1025)
  1912. at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:116)
  1913. at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:445)
  1914. at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1137)
  1915. at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:637)
  1916. at org.apache.tomcat.util.net.AprEndpoint$SocketWithOptionsProcessor.run(AprEndpoint.java:2512)
  1917. at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
  1918. at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
  1919. at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
  1920. at java.lang.Thread.run(Thread.java:748)
  1921. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:41,559| No concept found for 'CIEL:1115'
  1922. ERROR - CsvParser.process(211) |2020-04-15 23:23:41,571| An OpenMRS object could not be constructed or saved from the following CSV line:
  1923. [73674a9f-75fc-41ac-940c-842d321c817d, Cardiac exam findings - COVID, null, null, Finding, Coded, CIEL:1115;CIEL:1116, null, null, null]
  1924. java.lang.IllegalArgumentException: The object identified by 'CIEL:1115' could not be found in database. The parent or encompassing object referencing the following list was therefore not created/updated: [CIEL:1115;CIEL:1116].
  1925. at org.openmrs.module.initializer.api.utils.ListParser.parseList(ListParser.java:63)
  1926. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:38)
  1927. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:14)
  1928. at org.openmrs.module.initializer.api.CsvParser.createInstance(CsvParser.java:253)
  1929. at org.openmrs.module.initializer.api.CsvParser.process(CsvParser.java:201)
  1930. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.loadCsvFiles(BaseCsvLoader.java:77)
  1931. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.load(BaseCsvLoader.java:33)
  1932. at org.openmrs.module.initializer.InitializerActivator.started(InitializerActivator.java:33)
  1933. at org.openmrs.module.ModuleUtil.refreshApplicationContext(ModuleUtil.java:931)
  1934. at org.openmrs.module.web.WebModuleUtil.refreshWAC(WebModuleUtil.java:847)
  1935. at org.openmrs.module.web.WebModuleUtil.startModule(WebModuleUtil.java:312)
  1936. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:94)
  1937. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:89)
  1938. at org.openmrs.module.webservices.rest.web.v1_0.resource.openmrs1_8.ModuleResource1_8.upload(ModuleResource1_8.java:187)
  1939. at org.openmrs.module.webservices.rest.web.v1_0.controller.MainResourceController.upload(MainResourceController.java:104)
  1940. at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
  1941. at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
  1942. at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
  1943. at java.lang.reflect.Method.invoke(Method.java:498)
  1944. at org.springframework.web.bind.annotation.support.HandlerMethodInvoker.invokeHandlerMethod(HandlerMethodInvoker.java:177)
  1945. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.invokeHandlerMethod(AnnotationMethodHandlerAdapter.java:446)
  1946. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.handle(AnnotationMethodHandlerAdapter.java:434)
  1947. at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:943)
  1948. at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:877)
  1949. at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:966)
  1950. at org.springframework.web.servlet.FrameworkServlet.doPost(FrameworkServlet.java:868)
  1951. at javax.servlet.http.HttpServlet.service(HttpServlet.java:650)
  1952. at org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:842)
  1953. at javax.servlet.http.HttpServlet.service(HttpServlet.java:731)
  1954. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:303)
  1955. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1956. at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52)
  1957. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1958. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1959. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:73)
  1960. at org.openmrs.web.filter.GZIPFilter.doFilterInternal(GZIPFilter.java:65)
  1961. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1962. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1963. at org.openmrs.module.webservices.rest.web.filter.AuthorizationFilter.doFilter(AuthorizationFilter.java:105)
  1964. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1965. at org.openmrs.module.webservices.rest.web.filter.ContentTypeFilter.doFilter(ContentTypeFilter.java:64)
  1966. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1967. at org.springframework.web.filter.ShallowEtagHeaderFilter.doFilterInternal(ShallowEtagHeaderFilter.java:82)
  1968. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1969. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1970. at org.openmrs.module.owa.filter.OwaFilter.doFilter(OwaFilter.java:57)
  1971. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1972. at org.openmrs.module.referenceapplication.filter.RequireLoginLocationFilter.doFilter(RequireLoginLocationFilter.java:93)
  1973. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  1974. at org.openmrs.module.web.filter.ModuleFilter.doFilter(ModuleFilter.java:57)
  1975. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1976. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1977. at org.openmrs.web.filter.OpenmrsFilter.doFilterInternal(OpenmrsFilter.java:109)
  1978. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1979. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1980. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1981. at org.springframework.orm.hibernate4.support.OpenSessionInViewFilter.doFilterInternal(OpenSessionInViewFilter.java:150)
  1982. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1983. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1984. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1985. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  1986. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1987. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1988. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  1989. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1990. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1991. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  1992. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1993. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1994. at org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:88)
  1995. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  1996. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  1997. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  1998. at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:219)
  1999. at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:110)
  2000. at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:494)
  2001. at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:169)
  2002. at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:104)
  2003. at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:1025)
  2004. at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:116)
  2005. at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:445)
  2006. at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1137)
  2007. at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:637)
  2008. at org.apache.tomcat.util.net.AprEndpoint$SocketWithOptionsProcessor.run(AprEndpoint.java:2512)
  2009. at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
  2010. at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
  2011. at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
  2012. at java.lang.Thread.run(Thread.java:748)
  2013. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:41,630| No concept found for 'CIEL:1115'
  2014. ERROR - CsvParser.process(211) |2020-04-15 23:23:41,641| An OpenMRS object could not be constructed or saved from the following CSV line:
  2015. [43173d1f-518b-4f11-b440-7742b239876e, Extremity exam findings - COVID, null, null, Finding, Coded, CIEL:1115;CIEL:1116, null, null, null]
  2016. java.lang.IllegalArgumentException: The object identified by 'CIEL:1115' could not be found in database. The parent or encompassing object referencing the following list was therefore not created/updated: [CIEL:1115;CIEL:1116].
  2017. at org.openmrs.module.initializer.api.utils.ListParser.parseList(ListParser.java:63)
  2018. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:38)
  2019. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:14)
  2020. at org.openmrs.module.initializer.api.CsvParser.createInstance(CsvParser.java:253)
  2021. at org.openmrs.module.initializer.api.CsvParser.process(CsvParser.java:201)
  2022. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.loadCsvFiles(BaseCsvLoader.java:77)
  2023. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.load(BaseCsvLoader.java:33)
  2024. at org.openmrs.module.initializer.InitializerActivator.started(InitializerActivator.java:33)
  2025. at org.openmrs.module.ModuleUtil.refreshApplicationContext(ModuleUtil.java:931)
  2026. at org.openmrs.module.web.WebModuleUtil.refreshWAC(WebModuleUtil.java:847)
  2027. at org.openmrs.module.web.WebModuleUtil.startModule(WebModuleUtil.java:312)
  2028. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:94)
  2029. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:89)
  2030. at org.openmrs.module.webservices.rest.web.v1_0.resource.openmrs1_8.ModuleResource1_8.upload(ModuleResource1_8.java:187)
  2031. at org.openmrs.module.webservices.rest.web.v1_0.controller.MainResourceController.upload(MainResourceController.java:104)
  2032. at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
  2033. at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
  2034. at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
  2035. at java.lang.reflect.Method.invoke(Method.java:498)
  2036. at org.springframework.web.bind.annotation.support.HandlerMethodInvoker.invokeHandlerMethod(HandlerMethodInvoker.java:177)
  2037. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.invokeHandlerMethod(AnnotationMethodHandlerAdapter.java:446)
  2038. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.handle(AnnotationMethodHandlerAdapter.java:434)
  2039. at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:943)
  2040. at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:877)
  2041. at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:966)
  2042. at org.springframework.web.servlet.FrameworkServlet.doPost(FrameworkServlet.java:868)
  2043. at javax.servlet.http.HttpServlet.service(HttpServlet.java:650)
  2044. at org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:842)
  2045. at javax.servlet.http.HttpServlet.service(HttpServlet.java:731)
  2046. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:303)
  2047. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  2048. at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52)
  2049. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  2050. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  2051. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:73)
  2052. at org.openmrs.web.filter.GZIPFilter.doFilterInternal(GZIPFilter.java:65)
  2053. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  2054. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  2055. at org.openmrs.module.webservices.rest.web.filter.AuthorizationFilter.doFilter(AuthorizationFilter.java:105)
  2056. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  2057. at org.openmrs.module.webservices.rest.web.filter.ContentTypeFilter.doFilter(ContentTypeFilter.java:64)
  2058. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  2059. at org.springframework.web.filter.ShallowEtagHeaderFilter.doFilterInternal(ShallowEtagHeaderFilter.java:82)
  2060. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  2061. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  2062. at org.openmrs.module.owa.filter.OwaFilter.doFilter(OwaFilter.java:57)
  2063. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  2064. at org.openmrs.module.referenceapplication.filter.RequireLoginLocationFilter.doFilter(RequireLoginLocationFilter.java:93)
  2065. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  2066. at org.openmrs.module.web.filter.ModuleFilter.doFilter(ModuleFilter.java:57)
  2067. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  2068. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  2069. at org.openmrs.web.filter.OpenmrsFilter.doFilterInternal(OpenmrsFilter.java:109)
  2070. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  2071. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  2072. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  2073. at org.springframework.orm.hibernate4.support.OpenSessionInViewFilter.doFilterInternal(OpenSessionInViewFilter.java:150)
  2074. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  2075. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  2076. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  2077. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  2078. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  2079. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  2080. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  2081. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  2082. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  2083. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  2084. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  2085. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  2086. at org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:88)
  2087. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  2088. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  2089. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  2090. at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:219)
  2091. at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:110)
  2092. at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:494)
  2093. at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:169)
  2094. at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:104)
  2095. at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:1025)
  2096. at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:116)
  2097. at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:445)
  2098. at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1137)
  2099. at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:637)
  2100. at org.apache.tomcat.util.net.AprEndpoint$SocketWithOptionsProcessor.run(AprEndpoint.java:2512)
  2101. at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
  2102. at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
  2103. at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
  2104. at java.lang.Thread.run(Thread.java:748)
  2105. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:41,684| No concept found for 'CIEL:1115'
  2106. ERROR - CsvParser.process(211) |2020-04-15 23:23:41,700| An OpenMRS object could not be constructed or saved from the following CSV line:
  2107. [66cccc06-f673-43a7-9e33-b4f2f6031944, Neurologic exam findings - COVID, null, null, Finding, Coded, CIEL:1115;CIEL:1116, null, null, null]
  2108. java.lang.IllegalArgumentException: The object identified by 'CIEL:1115' could not be found in database. The parent or encompassing object referencing the following list was therefore not created/updated: [CIEL:1115;CIEL:1116].
  2109. at org.openmrs.module.initializer.api.utils.ListParser.parseList(ListParser.java:63)
  2110. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:38)
  2111. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:14)
  2112. at org.openmrs.module.initializer.api.CsvParser.createInstance(CsvParser.java:253)
  2113. at org.openmrs.module.initializer.api.CsvParser.process(CsvParser.java:201)
  2114. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.loadCsvFiles(BaseCsvLoader.java:77)
  2115. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.load(BaseCsvLoader.java:33)
  2116. at org.openmrs.module.initializer.InitializerActivator.started(InitializerActivator.java:33)
  2117. at org.openmrs.module.ModuleUtil.refreshApplicationContext(ModuleUtil.java:931)
  2118. at org.openmrs.module.web.WebModuleUtil.refreshWAC(WebModuleUtil.java:847)
  2119. at org.openmrs.module.web.WebModuleUtil.startModule(WebModuleUtil.java:312)
  2120. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:94)
  2121. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:89)
  2122. at org.openmrs.module.webservices.rest.web.v1_0.resource.openmrs1_8.ModuleResource1_8.upload(ModuleResource1_8.java:187)
  2123. at org.openmrs.module.webservices.rest.web.v1_0.controller.MainResourceController.upload(MainResourceController.java:104)
  2124. at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
  2125. at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
  2126. at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
  2127. at java.lang.reflect.Method.invoke(Method.java:498)
  2128. at org.springframework.web.bind.annotation.support.HandlerMethodInvoker.invokeHandlerMethod(HandlerMethodInvoker.java:177)
  2129. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.invokeHandlerMethod(AnnotationMethodHandlerAdapter.java:446)
  2130. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.handle(AnnotationMethodHandlerAdapter.java:434)
  2131. at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:943)
  2132. at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:877)
  2133. at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:966)
  2134. at org.springframework.web.servlet.FrameworkServlet.doPost(FrameworkServlet.java:868)
  2135. at javax.servlet.http.HttpServlet.service(HttpServlet.java:650)
  2136. at org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:842)
  2137. at javax.servlet.http.HttpServlet.service(HttpServlet.java:731)
  2138. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:303)
  2139. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  2140. at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52)
  2141. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  2142. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  2143. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:73)
  2144. at org.openmrs.web.filter.GZIPFilter.doFilterInternal(GZIPFilter.java:65)
  2145. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  2146. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  2147. at org.openmrs.module.webservices.rest.web.filter.AuthorizationFilter.doFilter(AuthorizationFilter.java:105)
  2148. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  2149. at org.openmrs.module.webservices.rest.web.filter.ContentTypeFilter.doFilter(ContentTypeFilter.java:64)
  2150. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  2151. at org.springframework.web.filter.ShallowEtagHeaderFilter.doFilterInternal(ShallowEtagHeaderFilter.java:82)
  2152. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  2153. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  2154. at org.openmrs.module.owa.filter.OwaFilter.doFilter(OwaFilter.java:57)
  2155. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  2156. at org.openmrs.module.referenceapplication.filter.RequireLoginLocationFilter.doFilter(RequireLoginLocationFilter.java:93)
  2157. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  2158. at org.openmrs.module.web.filter.ModuleFilter.doFilter(ModuleFilter.java:57)
  2159. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  2160. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  2161. at org.openmrs.web.filter.OpenmrsFilter.doFilterInternal(OpenmrsFilter.java:109)
  2162. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  2163. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  2164. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  2165. at org.springframework.orm.hibernate4.support.OpenSessionInViewFilter.doFilterInternal(OpenSessionInViewFilter.java:150)
  2166. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  2167. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  2168. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  2169. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  2170. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  2171. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  2172. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  2173. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  2174. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  2175. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  2176. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  2177. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  2178. at org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:88)
  2179. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  2180. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  2181. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  2182. at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:219)
  2183. at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:110)
  2184. at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:494)
  2185. at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:169)
  2186. at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:104)
  2187. at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:1025)
  2188. at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:116)
  2189. at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:445)
  2190. at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1137)
  2191. at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:637)
  2192. at org.apache.tomcat.util.net.AprEndpoint$SocketWithOptionsProcessor.run(AprEndpoint.java:2512)
  2193. at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
  2194. at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
  2195. at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
  2196. at java.lang.Thread.run(Thread.java:748)
  2197. WARN - HibernateConceptDAO.getConceptByName(1799) |2020-04-15 23:23:41,735| No concept found for 'CIEL:70116'
  2198. ERROR - CsvParser.process(211) |2020-04-15 23:23:41,748| An OpenMRS object could not be constructed or saved from the following CSV line:
  2199. [74570938-5ea1-4e96-bf81-63a986ad2341, MEDICATIONS TAKEN - COVID, null, null, Finding, Coded, CIEL:70116;CIEL:77897;CIEL:81073, null, null, null]
  2200. java.lang.IllegalArgumentException: The object identified by 'CIEL:70116' could not be found in database. The parent or encompassing object referencing the following list was therefore not created/updated: [CIEL:70116;CIEL:77897;CIEL:81073].
  2201. at org.openmrs.module.initializer.api.utils.ListParser.parseList(ListParser.java:63)
  2202. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:38)
  2203. at org.openmrs.module.initializer.api.c.NestedConceptLineProcessor.fill(NestedConceptLineProcessor.java:14)
  2204. at org.openmrs.module.initializer.api.CsvParser.createInstance(CsvParser.java:253)
  2205. at org.openmrs.module.initializer.api.CsvParser.process(CsvParser.java:201)
  2206. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.loadCsvFiles(BaseCsvLoader.java:77)
  2207. at org.openmrs.module.initializer.api.loaders.BaseCsvLoader.load(BaseCsvLoader.java:33)
  2208. at org.openmrs.module.initializer.InitializerActivator.started(InitializerActivator.java:33)
  2209. at org.openmrs.module.ModuleUtil.refreshApplicationContext(ModuleUtil.java:931)
  2210. at org.openmrs.module.web.WebModuleUtil.refreshWAC(WebModuleUtil.java:847)
  2211. at org.openmrs.module.web.WebModuleUtil.startModule(WebModuleUtil.java:312)
  2212. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:94)
  2213. at org.openmrs.module.webservices.helper.ModuleFactoryWrapper.startModule(ModuleFactoryWrapper.java:89)
  2214. at org.openmrs.module.webservices.rest.web.v1_0.resource.openmrs1_8.ModuleResource1_8.upload(ModuleResource1_8.java:187)
  2215. at org.openmrs.module.webservices.rest.web.v1_0.controller.MainResourceController.upload(MainResourceController.java:104)
  2216. at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
  2217. at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
  2218. at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
  2219. at java.lang.reflect.Method.invoke(Method.java:498)
  2220. at org.springframework.web.bind.annotation.support.HandlerMethodInvoker.invokeHandlerMethod(HandlerMethodInvoker.java:177)
  2221. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.invokeHandlerMethod(AnnotationMethodHandlerAdapter.java:446)
  2222. at org.springframework.web.servlet.mvc.annotation.AnnotationMethodHandlerAdapter.handle(AnnotationMethodHandlerAdapter.java:434)
  2223. at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:943)
  2224. at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:877)
  2225. at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:966)
  2226. at org.springframework.web.servlet.FrameworkServlet.doPost(FrameworkServlet.java:868)
  2227. at javax.servlet.http.HttpServlet.service(HttpServlet.java:650)
  2228. at org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:842)
  2229. at javax.servlet.http.HttpServlet.service(HttpServlet.java:731)
  2230. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:303)
  2231. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  2232. at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52)
  2233. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  2234. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  2235. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:73)
  2236. at org.openmrs.web.filter.GZIPFilter.doFilterInternal(GZIPFilter.java:65)
  2237. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  2238. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  2239. at org.openmrs.module.webservices.rest.web.filter.AuthorizationFilter.doFilter(AuthorizationFilter.java:105)
  2240. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  2241. at org.openmrs.module.webservices.rest.web.filter.ContentTypeFilter.doFilter(ContentTypeFilter.java:64)
  2242. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  2243. at org.springframework.web.filter.ShallowEtagHeaderFilter.doFilterInternal(ShallowEtagHeaderFilter.java:82)
  2244. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  2245. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  2246. at org.openmrs.module.owa.filter.OwaFilter.doFilter(OwaFilter.java:57)
  2247. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  2248. at org.openmrs.module.referenceapplication.filter.RequireLoginLocationFilter.doFilter(RequireLoginLocationFilter.java:93)
  2249. at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:71)
  2250. at org.openmrs.module.web.filter.ModuleFilter.doFilter(ModuleFilter.java:57)
  2251. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  2252. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  2253. at org.openmrs.web.filter.OpenmrsFilter.doFilterInternal(OpenmrsFilter.java:109)
  2254. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  2255. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  2256. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  2257. at org.springframework.orm.hibernate4.support.OpenSessionInViewFilter.doFilterInternal(OpenSessionInViewFilter.java:150)
  2258. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  2259. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  2260. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  2261. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  2262. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  2263. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  2264. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  2265. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  2266. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  2267. at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:107)
  2268. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  2269. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  2270. at org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:88)
  2271. at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  2272. at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  2273. at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  2274. at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:219)
  2275. at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:110)
  2276. at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:494)
  2277. at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:169)
  2278. at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:104)
  2279. at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:1025)
  2280. at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:116)
  2281. at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:445)
  2282. at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1137)
  2283. at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:637)
  2284. at org.apache.tomcat.util.net.AprEndpoint$SocketWithOptionsProcessor.run(AprEndpoint.java:2512)
  2285. at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
  2286. at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
  2287. at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
  2288. at java.lang.Thread.run(Thread.java:748)
  2289. ERROR - BaseCsvLoader.loadCsvFiles(89) |2020-04-15 23:23:41,753| local_covid_concepts.csv ('concepts' domain) was processed but errors remained.
  2290. ERROR - BaseCsvLoader.loadCsvFiles(91) |2020-04-15 23:23:41,754| 50 out of 60 entities were saved.
  2291. ERROR - BaseCsvLoader.loadCsvFiles(92) |2020-04-15 23:23:41,757|
  2292. ERROR - BaseCsvLoader.loadCsvFiles(94) |2020-04-15 23:23:41,758| [57b762ca-0ea8-4e86-9449-18c58a651cf3, SARS-CoV-2 Occupational Exposure, null, Any exposures to SARS-CoV-2 related to the patient's occupation, Question, Coded, CIEL:163468;CIEL:5619;987a7256-ed27-4747-b9cc-c46472dd2a3c, null, null, null]
  2293. ERROR - BaseCsvLoader.loadCsvFiles(94) |2020-04-15 23:23:41,760| [f3f0fdd4-632d-4998-9637-1a32c02a4512, PROBLEM LIST - COVID, null, null, Diagnosis, Coded, CIEL:117277;CIEL:119481;CIEL:6032;CIEL:6033;CIEL:165646;CIEL:116031;CIEL:121375;CIEL:155569;CIEL:119270;CIEL:5016;CIEL:117399;CIEL:155;CIEL:134337;CIEL:145439;CIEL:5622;CIEL:1295;CIEL:111103;CIEL:119910, null, null, null]
  2294. ERROR - BaseCsvLoader.loadCsvFiles(94) |2020-04-15 23:23:41,762| [29ed77d2-acd8-4095-b54c-38397b77adb4, GENERAL EXAM FINDINGS - COVID, null, null, Finding, Coded, CIEL:1115;CIEL:1116, null, null, null]
  2295. ERROR - BaseCsvLoader.loadCsvFiles(94) |2020-04-15 23:23:41,764| [c9672fb7-83b8-4543-a8c9-3e5ad8b4a58c, HEENT exam findings - COVID, null, null, Finding, Coded, CIEL:1115;CIEL:1116, null, null, null]
  2296. ERROR - BaseCsvLoader.loadCsvFiles(94) |2020-04-15 23:23:41,766| [b68e2c76-c218-48b2-9164-246b3f6a0dc8, Pulmonary exam findings - COVID, null, null, Finding, Coded, CIEL:1115;CIEL:1116, null, null, null]
  2297. ERROR - BaseCsvLoader.loadCsvFiles(94) |2020-04-15 23:23:41,768| [a356cc13-9009-407f-9fb7-b51c11918edf, Abdominal exam findings - COVID, null, null, Finding, Coded, CIEL:1115;CIEL:1116, null, null, null]
  2298. ERROR - BaseCsvLoader.loadCsvFiles(94) |2020-04-15 23:23:41,769| [73674a9f-75fc-41ac-940c-842d321c817d, Cardiac exam findings - COVID, null, null, Finding, Coded, CIEL:1115;CIEL:1116, null, null, null]
  2299. ERROR - BaseCsvLoader.loadCsvFiles(94) |2020-04-15 23:23:41,769| [43173d1f-518b-4f11-b440-7742b239876e, Extremity exam findings - COVID, null, null, Finding, Coded, CIEL:1115;CIEL:1116, null, null, null]
  2300. ERROR - BaseCsvLoader.loadCsvFiles(94) |2020-04-15 23:23:41,770| [66cccc06-f673-43a7-9e33-b4f2f6031944, Neurologic exam findings - COVID, null, null, Finding, Coded, CIEL:1115;CIEL:1116, null, null, null]
  2301. ERROR - BaseCsvLoader.loadCsvFiles(94) |2020-04-15 23:23:41,771| [74570938-5ea1-4e96-bf81-63a986ad2341, MEDICATIONS TAKEN - COVID, null, null, Finding, Coded, CIEL:70116;CIEL:77897;CIEL:81073, null, null, null]
  2302. ERROR - BaseCsvLoader.loadCsvFiles(96) |2020-04-15 23:23:41,771|
  2303. INFO - BaseCsvLoader.loadCsvFiles(75) |2020-04-15 23:23:43,273| Attempting to process 51967 CSV lines that have not been processed yet...
  2304. INFO - LoggingAdvice.invoke(116) |2020-04-15 23:23:43,307| In method ConceptService.saveConcept. Arguments: Concept=Concept #null,
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