bwa_blast_job

# prologue
if not check_if_exec_exist():
    install_exec()
if not check_if_db_exist("db_path"): exit(1)
check_md5sum("db")
get_query("input_path")

#main
launch_bwa("query","db")
launch_blast("query","db"

# epilogue
md5sum("outfile")
gzip_out("outfile")
save_out("outfile")
clean_all()