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ProzacR

Error in { : task 3 failed - "Stopping"

ProzacR
Mar 15th, 2016
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  1. -> SVM-RFE : Support Vector Machines Recursive Feature Elimination ...
  2.     --> repeatedcv
  3. +(rfe) fit Fold01 size: 64
  4. +(rfe) fit Fold02 size: 64
  5. +(rfe) fit Fold03 size: 64
  6. +(rfe) fit Fold04 size: 64
  7. Something is wrong; all the RMSE metric values are missing:
  8.       RMSE        Rsquared  
  9.  Min.   : NA   Min.   : NA  
  10.  1st Qu.: NA   1st Qu.: NA  
  11.  Median : NA   Median : NA  
  12.  Mean   :NaN   Mean   :NaN  
  13.  3rd Qu.: NA   3rd Qu.: NA  
  14.  Max.   : NA   Max.   : NA  
  15.  NA's   :15    NA's   :15  
  16. +(rfe) fit Fold07 size: 64
  17. Something is wrong; all the RMSE metric values are missing:
  18.       RMSE        Rsquared  
  19.  Min.   : NA   Min.   : NA  
  20.  1st Qu.: NA   1st Qu.: NA  
  21.  Median : NA   Median : NA  
  22.  Mean   :NaN   Mean   :NaN  
  23.  3rd Qu.: NA   3rd Qu.: NA  
  24.  Max.   : NA   Max.   : NA  
  25.  NA's   :15    NA's   :15  
  26. +(rfe) fit Fold08 size: 64
  27. -(rfe) fit Fold01 size: 64
  28. +(rfe) imp Fold01
  29. -(rfe) imp Fold01
  30. +(rfe) fit Fold01 size: 32
  31. -(rfe) fit Fold02 size: 64
  32. +(rfe) imp Fold02
  33. -(rfe) imp Fold02
  34. +(rfe) fit Fold02 size: 32
  35. Something is wrong; all the RMSE metric values are missing:
  36.       RMSE        Rsquared  
  37.  Min.   : NA   Min.   : NA  
  38.  1st Qu.: NA   1st Qu.: NA  
  39.  Median : NA   Median : NA  
  40.  Mean   :NaN   Mean   :NaN  
  41.  3rd Qu.: NA   3rd Qu.: NA  
  42.  Max.   : NA   Max.   : NA  
  43.  NA's   :15    NA's   :15  
  44. -(rfe) fit Fold01 size: 32
  45. +(rfe) imp Fold01 size: 32
  46. -(rfe) imp Fold01 size: 32
  47. +(rfe) fit Fold01 size: 16
  48. -(rfe) fit Fold08 size: 64
  49. +(rfe) imp Fold08
  50. -(rfe) imp Fold08
  51. +(rfe) fit Fold08 size: 32
  52. -(rfe) fit Fold02 size: 32
  53. +(rfe) imp Fold02 size: 32
  54. -(rfe) imp Fold02 size: 32
  55. +(rfe) fit Fold02 size: 16
  56. -(rfe) fit Fold01 size: 16
  57. +(rfe) imp Fold01 size: 16
  58. -(rfe) imp Fold01 size: 16
  59. +(rfe) fit Fold01 size:  8
  60. -(rfe) fit Fold08 size: 32
  61. +(rfe) imp Fold08 size: 32
  62. -(rfe) imp Fold08 size: 32
  63. +(rfe) fit Fold08 size: 16
  64. -(rfe) fit Fold02 size: 16
  65. +(rfe) imp Fold02 size: 16
  66. -(rfe) imp Fold02 size: 16
  67. +(rfe) fit Fold02 size:  8
  68. -(rfe) fit Fold01 size:  8
  69. +(rfe) imp Fold01 size:  8
  70. -(rfe) imp Fold01 size:  8
  71. +(rfe) fit Fold01 size:  4
  72. -(rfe) fit Fold08 size: 16
  73. +(rfe) imp Fold08 size: 16
  74. -(rfe) imp Fold08 size: 16
  75. +(rfe) fit Fold08 size:  8
  76. -(rfe) fit Fold02 size:  8
  77. +(rfe) imp Fold02 size:  8
  78. -(rfe) imp Fold02 size:  8
  79. +(rfe) fit Fold02 size:  4
  80. -(rfe) fit Fold01 size:  4
  81. +(rfe) imp Fold01 size:  4
  82. -(rfe) imp Fold01 size:  4
  83. +(rfe) fit Fold01 size:  2
  84. -(rfe) fit Fold08 size:  8
  85. +(rfe) imp Fold08 size:  8
  86. -(rfe) imp Fold08 size:  8
  87. +(rfe) fit Fold08 size:  4
  88. -(rfe) fit Fold02 size:  4
  89. +(rfe) imp Fold02 size:  4
  90. -(rfe) imp Fold02 size:  4
  91. +(rfe) fit Fold02 size:  2
  92. -(rfe) fit Fold01 size:  2
  93. +(rfe) imp Fold01 size:  2
  94. -(rfe) imp Fold01 size:  2
  95. +(rfe) fit Fold05 size: 64
  96. -(rfe) fit Fold08 size:  4
  97. +(rfe) imp Fold08 size:  4
  98. -(rfe) imp Fold08 size:  4
  99. +(rfe) fit Fold08 size:  2
  100. -(rfe) fit Fold02 size:  2
  101. +(rfe) imp Fold02 size:  2
  102. -(rfe) imp Fold02 size:  2
  103. +(rfe) fit Fold06 size: 64
  104. Something is wrong; all the RMSE metric values are missing:
  105.       RMSE        Rsquared  
  106.  Min.   : NA   Min.   : NA  
  107.  1st Qu.: NA   1st Qu.: NA  
  108.  Median : NA   Median : NA  
  109.  Mean   :NaN   Mean   :NaN  
  110.  3rd Qu.: NA   3rd Qu.: NA  
  111.  Max.   : NA   Max.   : NA  
  112.  NA's   :15    NA's   :15  
  113. +(rfe) fit Fold09 size: 64
  114. -(rfe) fit Fold08 size:  2
  115. +(rfe) imp Fold08 size:  2
  116. -(rfe) imp Fold08 size:  2
  117. Something is wrong; all the RMSE metric values are missing:
  118.       RMSE        Rsquared  
  119.  Min.   : NA   Min.   : NA  
  120.  1st Qu.: NA   1st Qu.: NA  
  121.  Median : NA   Median : NA  
  122.  Mean   :NaN   Mean   :NaN  
  123.  3rd Qu.: NA   3rd Qu.: NA  
  124.  Max.   : NA   Max.   : NA  
  125.  NA's   :15    NA's   :15  
  126. +(rfe) fit Fold10 size: 64
  127. -(rfe) fit Fold09 size: 64
  128. +(rfe) imp Fold09
  129. -(rfe) imp Fold09
  130. +(rfe) fit Fold09 size: 32
  131. -(rfe) fit Fold10 size: 64
  132. +(rfe) imp Fold10
  133. -(rfe) imp Fold10
  134. +(rfe) fit Fold10 size: 32
  135. -(rfe) fit Fold09 size: 32
  136. +(rfe) imp Fold09 size: 32
  137. -(rfe) imp Fold09 size: 32
  138. +(rfe) fit Fold09 size: 16
  139. -(rfe) fit Fold10 size: 32
  140. +(rfe) imp Fold10 size: 32
  141. -(rfe) imp Fold10 size: 32
  142. +(rfe) fit Fold10 size: 16
  143. -(rfe) fit Fold09 size: 16
  144. +(rfe) imp Fold09 size: 16
  145. -(rfe) imp Fold09 size: 16
  146. +(rfe) fit Fold09 size:  8
  147. -(rfe) fit Fold10 size: 16
  148. +(rfe) imp Fold10 size: 16
  149. -(rfe) imp Fold10 size: 16
  150. +(rfe) fit Fold10 size:  8
  151. -(rfe) fit Fold09 size:  8
  152. +(rfe) imp Fold09 size:  8
  153. -(rfe) imp Fold09 size:  8
  154. +(rfe) fit Fold09 size:  4
  155. -(rfe) fit Fold10 size:  8
  156. +(rfe) imp Fold10 size:  8
  157. -(rfe) imp Fold10 size:  8
  158. +(rfe) fit Fold10 size:  4
  159. -(rfe) fit Fold09 size:  4
  160. +(rfe) imp Fold09 size:  4
  161. -(rfe) imp Fold09 size:  4
  162. +(rfe) fit Fold09 size:  2
  163. -(rfe) fit Fold10 size:  4
  164. +(rfe) imp Fold10 size:  4
  165. -(rfe) imp Fold10 size:  4
  166. +(rfe) fit Fold10 size:  2
  167. -(rfe) fit Fold09 size:  2
  168. +(rfe) imp Fold09 size:  2
  169. -(rfe) imp Fold09 size:  2
  170. -(rfe) fit Fold10 size:  2
  171. +(rfe) imp Fold10 size:  2
  172. -(rfe) imp Fold10 size:  2
  173. Error in { : task 3 failed - "Stopping"
  174. In addition: There were 50 or more warnings (use warnings() to see the first 50)
  175. > warnings()
  176. Warning messages:
  177. 1: In plot.window(...) : "tl.cex" is not a graphical parameter
  178. 2: In plot.window(...) : "title" is not a graphical parameter
  179. 3: In plot.window(...) : "method" is not a graphical parameter
  180. 4: In plot.window(...) : "is.corr" is not a graphical parameter
  181. 5: In plot.window(...) : "cl.lim" is not a graphical parameter
  182. 6: In plot.window(...) : "cl.cex" is not a graphical parameter
  183. 7: In plot.window(...) : "addgrid.col" is not a graphical parameter
  184. 8: In plot.window(...) : "addshade" is not a graphical parameter
  185. 9: In plot.window(...) : "addCoef.col" is not a graphical parameter
  186. 10: In plot.window(...) : "diag" is not a graphical parameter
  187. 11: In plot.xy(xy, type, ...) : "tl.cex" is not a graphical parameter
  188. 12: In plot.xy(xy, type, ...) : "title" is not a graphical parameter
  189. 13: In plot.xy(xy, type, ...) : "method" is not a graphical parameter
  190. 14: In plot.xy(xy, type, ...) : "is.corr" is not a graphical parameter
  191. 15: In plot.xy(xy, type, ...) : "cl.lim" is not a graphical parameter
  192. 16: In plot.xy(xy, type, ...) : "cl.cex" is not a graphical parameter
  193. 17: In plot.xy(xy, type, ...) : "addgrid.col" is not a graphical parameter
  194. 18: In plot.xy(xy, type, ...) : "addshade" is not a graphical parameter
  195. 19: In plot.xy(xy, type, ...) : "addCoef.col" is not a graphical parameter
  196. 20: In plot.xy(xy, type, ...) : "diag" is not a graphical parameter
  197. 21: In axis(side = side, at = at, labels = labels, ...) :
  198.   "tl.cex" is not a graphical parameter
  199. 22: In axis(side = side, at = at, labels = labels, ...) :
  200.   "title" is not a graphical parameter
  201. 23: In axis(side = side, at = at, labels = labels, ...) :
  202.   "method" is not a graphical parameter
  203. 24: In axis(side = side, at = at, labels = labels, ...) :
  204.   "is.corr" is not a graphical parameter
  205. 25: In axis(side = side, at = at, labels = labels, ...) :
  206.   "cl.lim" is not a graphical parameter
  207. 26: In axis(side = side, at = at, labels = labels, ...) :
  208.   "cl.cex" is not a graphical parameter
  209. 27: In axis(side = side, at = at, labels = labels, ...) :
  210.   "addgrid.col" is not a graphical parameter
  211. 28: In axis(side = side, at = at, labels = labels, ...) :
  212.   "addshade" is not a graphical parameter
  213. 29: In axis(side = side, at = at, labels = labels, ...) :
  214.   "addCoef.col" is not a graphical parameter
  215. 30: In axis(side = side, at = at, labels = labels, ...) :
  216.   "diag" is not a graphical parameter
  217. 31: In axis(side = side, at = at, labels = labels, ...) :
  218.   "tl.cex" is not a graphical parameter
  219. 32: In axis(side = side, at = at, labels = labels, ...) :
  220.   "title" is not a graphical parameter
  221. 33: In axis(side = side, at = at, labels = labels, ...) :
  222.   "method" is not a graphical parameter
  223. 34: In axis(side = side, at = at, labels = labels, ...) :
  224.   "is.corr" is not a graphical parameter
  225. 35: In axis(side = side, at = at, labels = labels, ...) :
  226.   "cl.lim" is not a graphical parameter
  227. 36: In axis(side = side, at = at, labels = labels, ...) :
  228.   "cl.cex" is not a graphical parameter
  229. 37: In axis(side = side, at = at, labels = labels, ...) :
  230.   "addgrid.col" is not a graphical parameter
  231. 38: In axis(side = side, at = at, labels = labels, ...) :
  232.   "addshade" is not a graphical parameter
  233. 39: In axis(side = side, at = at, labels = labels, ...) :
  234.   "addCoef.col" is not a graphical parameter
  235. 40: In axis(side = side, at = at, labels = labels, ...) :
  236.   "diag" is not a graphical parameter
  237. 41: In box(...) : "tl.cex" is not a graphical parameter
  238. 42: In box(...) : "title" is not a graphical parameter
  239. 43: In box(...) : "method" is not a graphical parameter
  240. 44: In box(...) : "is.corr" is not a graphical parameter
  241. 45: In box(...) : "cl.lim" is not a graphical parameter
  242. 46: In box(...) : "cl.cex" is not a graphical parameter
  243. 47: In box(...) : "addgrid.col" is not a graphical parameter
  244. 48: In box(...) : "addshade" is not a graphical parameter
  245. 49: In box(...) : "addCoef.col" is not a graphical parameter
  246. 50: In box(...) : "diag" is not a graphical parameter
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