Circos karyotype dataformat

Go to http://genome-test.soe.ucsc.edu/cgi-bin/hgTables to get Tilapia genome table
Clade>Vertebrate    Genome>Nile Tilapia     Assembly>Nov. 2016(ASM185804v2/oreNil3)
group>Mapping and Sequencing    track>Assemple
And get the 'output' file like this:

#bin    chrom   chromStart  chromEnd    ix  type    frag    fragStart   fragEnd strand
585 chrM    0   16627   1   O   NC_013663.1 0   16627   +
1   chrLG1  0   38372991    1   O   MKQE01000001.1  0   38372991    +
1   chrLG2  0   35256741    1   O   MKQE01000012.1  0   35256741    +
1   chrLG4  0   38038224    1   O   MKQE01000018.1  0   38038224    +
1   chrLG5  0   34628617    1   O   MKQE01000019.1  0   34628617    +
1   chrLG6  0   44571662    1   O   MKQE01000020.1  0   44571662    +
1   chrLG7  0   62059223    1   O   MKQE01000021.1  0   62059223    +
1   chrLG8  0   30802437    1   O   MKQE01000022.1  0   30802437    +
1   chrLG9  0   27519051    1   O   MKQE01000023.1  0   27519051    +
1   chrLG10 0   32426571    1   O   MKQE01000002.1  0   32426571    +
1   chrLG11 0   36466354    1   O   MKQE01000003.1  0   36466354    +
1   chrLG12 0   41232431    1   O   MKQE01000004.1  0   41232431    +
1   chrLG13 0   32337344    1   O   MKQE01000005.1  0   32337344    +
1   chrLG14 0   39264731    1   O   MKQE01000006.1  0   39264731    +
1   chrLG15 0   36154882    1   O   MKQE01000007.1  0   36154882    +
1   chrLG16 0   43860769    1   O   MKQE01000008.1  0   43860769    +
1   chrLG17 0   40919683    1   O   MKQE01000009.1  0   40919683    +
1   chrLG18 0   37007722    1   O   MKQE01000010.1  0   37007722    +
1   chrLG19 0   31245232    1   O   MKQE01000011.1  0   31245232    +
1   chrLG20 0   36767035    1   O   MKQE01000013.1  0   36767035    +
1   chrLG22 0   37011614    1   O   MKQE01000014.1  0   37011614    +
1   chrLG23 0   44097196    1   O   MKQE01000015.1  0   44097196    +
1   chrLG3a 0   14041792    1   O   MKQE01000016.1  0   14041792    +
1   chrLG3b 0   54508961    1   O   MKQE01000017.1  0   54508961    +

Then you have to turn this genome table file into this format:(or just use my format)

chr - M M   0   16627       chrM
chr - LG1   1   0   38372991        chr1
chr - LG2   2   0   35256741        chr2
chr - LG3a  3a  0   14041792        chr3
chr - LG3b  3b  0   54508961        lum70chr3
chr - LG4   4   0   38038224        chr4
chr - LG5   5   0   34628617        chr5
chr - LG6   6   0   44571662        chr6
chr - LG7   7   0   62059223        chr7
chr - LG8   8   0   30802437        chr8
chr - LG9   9   0   27519051        chr9
chr - LG10  10  0   32426571        chr10
chr - LG11  11  0   36466354        chr11
chr - LG12  12  0   41232431        chr12
chr - LG13  13  0   32337344        chr13
chr - LG14  14  0   39264731        chr14
chr - LG15  15  0   36154882        chr15
chr - LG16  16  0   43860769        chr16
chr - LG17  17  0   40919683        chr17
chr - LG18  18  0   37007722        chr18
chr - LG19  19  0   31245232        chr19
chr - LG20  20  0   36767035        chr20
chr - LG22  22  0   37011614        chr22
chr - LG23  23  0   44097196        chr23

Save these text as karyotype.nile.tilapia.oreNil3.txt
put it into /$anaconda_install_path/data/karyotype/